ggKbase home page

rifcsphigho2_02_scaffold_141897_4

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_19b

near complete RP 31 / 55 MC: 6 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 3
Location: 2015..2290

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L34e n=2 Tax=Methanothermobacter RepID=D9PV66_METTM similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 88.0
  • Bit_score: 99
  • Evalue 1.40e-18
rpl34E; 50S ribosomal protein L34E similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 88.0
  • Bit_score: 99
  • Evalue 4.00e-19
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Met similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 88.0
  • Bit_score: 99
  • Evalue 2.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanothermobacter sp. CaT2 → Methanothermobacter → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 276
ATGCCACGAGGAATGTTCAAATCAGGACGATTACGAAAAATATCAGTGAGAACGCCCGGCTCTCGAGTCGTCGTTCATTACCGCGAGCGCAAGCCGTCAAAGACGATATGCGGCTCATGTAAAAAGCAATTAGCGGGAGTACCGAAAGATATTCCTTCCGTTGTGAGGAATATGCCGAAGTCTGCTAAGAGGCCAGAACGACCTTATGGTGGAATGTTCTGCTCTGCCTGTACCAGATTGTTATTGAAACAACAAGCACGGGGTGCATCACAATGA
PROTEIN sequence
Length: 92
MPRGMFKSGRLRKISVRTPGSRVVVHYRERKPSKTICGSCKKQLAGVPKDIPSVVRNMPKSAKRPERPYGGMFCSACTRLLLKQQARGASQ*