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rifcsphigho2_02_scaffold_141897

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_141897_1

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3..104
-----------------
DNA (102bp)
protein (34aa)
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsphigho2_02_scaffold_141897_2

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235..954
-----------------
DNA (720bp)
protein (240aa)
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46823.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_141897_3
unknown

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973..1848
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

rifcsphigho2_02_scaffold_141897_4
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2015..2290
-----------------
DNA (276bp)
protein (92aa)
50S ribosomal protein L34e n=2 Tax=Methanothermobacter RepID=D9PV66_METTM
rpl34E; 50S ribosomal protein L34E
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Met
rifcsphigho2_02_scaffold_141897_5
unknown

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2287..2520
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_141897_6

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comp(2589..2858)
-----------------
DNA (270bp)
protein (90aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ37_THEBM
Suspect SCG annotation. See neighboring gene [rifcsphigho2_02_scaffold_141897_7].
phenylalanyl-tRNA synthetase subunit beta
rifcsphigho2_02_scaffold_141897_7

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comp(2947..3696)
-----------------
DNA (750bp)
protein (250aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=5041804 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_02_scaffold_141897_8
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3659..4114)
-----------------
DNA (456bp)
protein (152aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR9
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Suspect SCG annotation. See neighboring gene [rifcsphigho2_02_scaffold_141897_7].
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_02_scaffold_141897_9
AR9, Woesearchaeaota, DPANN, Archaea

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comp(4121..5641)
-----------------
DNA (1521bp)
protein (507aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=AR9
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_02_scaffold_141897_10
AR9, Woesearchaeaota, DPANN, Archaea

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comp(5726..5950)
-----------------
DNA (225bp)
protein (75aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5102985 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=AR9
Displaying 10 items

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