ggKbase home page

RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..339)
-----------------
DNA (339bp)
protein (113aa)
ISPsy20 transposase IstB n=1 Tax=uncultured bacterium RepID=C6L0X2_9BACT
istB; ISPsy20, transposase IstB
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(329..616)
-----------------
DNA (288bp)
protein (96aa)
ISPsy20 transposase IstA n=1 Tax=uncultured bacterium RepID=C6L0X3_9BACT
istA; ISPsy20, transposase IstA
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(720..1331)
-----------------
DNA (612bp)
protein (204aa)
Integrase, catalytic region n=2 Tax=Rhizobium RepID=N6U3F9_9RHIZ
putative IS21 family transposase, OrfA
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1371..1973)
-----------------
DNA (603bp)
protein (201aa)
ISPsy20 transposase/integrase IstA n=1 Tax=uncultured bacterium RepID=C6L0X4_9BACT
istA; ISPsy20, transposase IstA
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2186..4177)
-----------------
DNA (1992bp)
protein (664aa)
UPI0003CE3D68 related cluster n=1 Tax=unknown RepID=UPI0003CE3D68
Fis family GAF modulated sigma54 specific transcriptional regulator
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4276..4752)
-----------------
DNA (477bp)
protein (159aa)
UPI0003D1AB70 related cluster n=1 Tax=unknown RepID=UPI0003D1AB70
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4891..5097)
-----------------
DNA (207bp)
protein (69aa)
UPI0003D6AB6F related cluster n=1 Tax=unknown RepID=UPI0003D6AB6F
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..6227)
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2J5R7_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6241..6564)
-----------------
DNA (324bp)
protein (108aa)
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6935..8602
-----------------
DNA (1668bp)
protein (556aa)
Methane/Phenol/Toluene Hydroxylase (EC:1.14.13.25)
UPI0003CEF8AD related cluster n=2 Tax=unknown RepID=UPI0003CEF8AD
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8704..9768
-----------------
DNA (1065bp)
protein (355aa)
Oxidoreductase FAD/NAD(P)-binding subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S2W6_9PROT
oxidoreductase FAD/NAD(P)-binding subunit
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9807..10865
-----------------
DNA (1059bp)
protein (353aa)
UPI0003CF7361 related cluster n=1 Tax=unknown RepID=UPI0003CF7361
methane/phenol/toluene hydroxylase
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10877..11245
-----------------
DNA (369bp)
protein (123aa)
Monooxygenase component MmoB/DmpM n=5 Tax=Rhodobacter RepID=A3PJU9_RHOS1
Monooxygenase component MmoB/DmpM
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11306..12331
-----------------
DNA (1026bp)
protein (342aa)
UPI0003CF4102 related cluster n=1 Tax=unknown RepID=UPI0003CF4102
putative metal-dependent hydrolase of the TIM-barrel fold protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..13146
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JIE1_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13195..14826
-----------------
DNA (1632bp)
protein (544aa)
UPI0003CEC53A related cluster n=1 Tax=unknown RepID=UPI0003CEC53A
groL; 60 kDa chaperonin
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14862..15905
-----------------
DNA (1044bp)
protein (348aa)
Putative Zinc-containing alcohol dehydrogenase (EC:1.1.1.1)
UPI0003CE6B18 related cluster n=1 Tax=unknown RepID=UPI0003CE6B18
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16033..16686
-----------------
DNA (654bp)
protein (218aa)
MIP family channel proteins n=3 Tax=Rhodobacter sphaeroides RepID=B9KSE1_RHOSK
aqpZ; aquaporin z, Major Intrinsic Protein (MIP) Family
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16865..17260
-----------------
DNA (396bp)
protein (132aa)
Lactoylglutathione lyase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHH6_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17384..18442)
-----------------
DNA (1059bp)
protein (353aa)
periplasmic protein TorT (EC:3.6.3.17)
TMAO reductase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMD5_9RHOB
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18500..21382
-----------------
DNA (2883bp)
protein (961aa)
two-component system, sensor histidine kinase TorS (EC:2.7.13.3)
Two-component system, sensor histidine kinase TorS n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XUC9_PARAH
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21363..22067)
-----------------
DNA (705bp)
protein (235aa)
Chemotaxis protein CheY n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMM2_9RHOB
transcriptional regulatory protein TorR
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22244..23188
-----------------
DNA (945bp)
protein (315aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037D2C20
glycine betaine-binding periplasmic protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23265..24278
-----------------
DNA (1014bp)
protein (338aa)
Glycine betaine/proline ABC transporter, ATP-binding protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2E1_9RHOB
glycine betaine/proline ABC transporter
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24278..26209
-----------------
DNA (1932bp)
protein (644aa)
ABC transporter permease n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002D66D67
glycine/betaine ABC transporter permease
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26739..29336
-----------------
DNA (2598bp)
protein (866aa)
P-type HAD superfamily ATPase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6N3_9RHIZ
ATPase E1-E2 type
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29658..35048
-----------------
DNA (5391bp)
protein (1797aa)
Outer membrane autotransporter barrel n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY83_METFK
Outer membrane autotransporter barrel
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35060..35176
-----------------
DNA (117bp)
protein (39aa)
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35436..35978
-----------------
DNA (543bp)
protein (181aa)
Transcriptional regulator, LuxR family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X8K4_9RHOB
transcriptional regulator
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_34_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36401..37300
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003654889
hypothetical protein
Displaying items 1-30 of 298 in total

View Taxonomy