ggKbase home page

RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36..179)
-----------------
DNA (144bp)
protein (48aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JQ79_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190..681)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003770F66
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..1302)
-----------------
DNA (519bp)
protein (173aa)
DNA repair protein RadC n=1 Tax=Paracoccus sp. N5 RepID=UPI00035DAAB9
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1412..1852)
-----------------
DNA (441bp)
protein (147aa)
DNA repair protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003828407
DNA repair protein RadC
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1977..3176)
-----------------
DNA (1200bp)
protein (400aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1R6_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3317..5449)
-----------------
DNA (2133bp)
protein (711aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HH05_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5682..6764)
-----------------
DNA (1083bp)
protein (361aa)
ATPase central domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HX18_9RHIZ
ATPase central domain-containing protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..7428)
-----------------
DNA (405bp)
protein (135aa)
single-stranded DNA-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F518
single-stranded DNA-binding protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7867..8184
-----------------
DNA (318bp)
protein (106aa)
Histone-like nucleoid-structuring (H-NS) protein Spb-like DNA-binding regulatory protein n=1 Tax=Rhizobium sp. RepID=L0NMB3_RHISP
histone family protein nucleoid-structuring protein H-NS
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8304..9398
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NNN7_RHISP
ftsA; cell filamentation cAMP-inducing protein Fic
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9545..9709)
-----------------
DNA (165bp)
protein (55aa)
Uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=V8HR72_RHOCA
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10113..10586)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000364A9B0
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..12857)
-----------------
DNA (2172bp)
protein (724aa)
Putative uncharacterized protein id=2479275 bin=GWF1_Rhodobacteraceae_65_7 species=Pelagibaca bermudensis genus=Pelagibaca taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
ParB family protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12985..14097)
-----------------
DNA (1113bp)
protein (371aa)
Plasmid replication protein RepC id=2479278 bin=GWF1_Rhodobacteraceae_65_7 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
replication initiation protein RepC
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14301..15230)
-----------------
DNA (930bp)
protein (310aa)
Plasmid partitioning protein ParB id=2479281 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
repB1; replication protein B
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15220..16401)
-----------------
DNA (1182bp)
protein (394aa)
Plasmid partitioning protein ParA id=2479286 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
repA; RepA partitioning protein/ATPase, ParA type
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16659..17543)
-----------------
DNA (885bp)
protein (295aa)
resolvase n=1 Tax=Martelella mediterranea RepID=UPI000365427B
resolvase domain-containing protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17806..18996
-----------------
DNA (1191bp)
protein (397aa)
Putative uncharacterized protein id=3002202 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19189..19767
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIZ6_9RHOB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20303..20413)
-----------------
DNA (111bp)
protein (37aa)
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20450..21337
-----------------
DNA (888bp)
protein (296aa)
transposase n=1 Tax=Martelella mediterranea RepID=UPI0003617DC3
transposase
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21478..22362)
-----------------
DNA (885bp)
protein (295aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11NC5_MESSB
GntR family transcriptional regulator
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22407..24644)
-----------------
DNA (2238bp)
protein (746aa)
Large subunit of N,N-dimethylformamidase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MX7_MESSB
large subunit of N,N-dimethylformamidase
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24655..24996)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MX8_MESSB
hypothetical protein
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25052..26125)
-----------------
DNA (1074bp)
protein (358aa)
Putrescine-binding periplasmic protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MX9_MESSB
extracellular solute-binding protein rbh
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26122..26958)
-----------------
DNA (837bp)
protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MY0_MESSB
binding-protein-dependent transport systems inner membrane component
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26955..27860)
-----------------
DNA (906bp)
protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MY1_MESSB
binding-protein-dependent transport systems inner membrane component
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27862..28968)
-----------------
DNA (1107bp)
protein (369aa)
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MY2_MESSB
spermidine/putrescine ABC transporter ATPase subunit
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29086..30168
-----------------
DNA (1083bp)
protein (361aa)
L-aminopeptidase DmpA, Serine peptidase, MEROPS family S58 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MY3_MESSB
aminopeptidase DmpA
RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_Rhodobacterales_62_130_rifcsphigho2_02_scaffold_1044_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30193..31587)
-----------------
DNA (1395bp)
protein (465aa)
Succinate semialdehyde dehydrogenase n=1 Tax=Roseobacter sp. MED193 RepID=A3XDX3_9RHOB
aldehyde dehydrogenase
Displaying items 1-30 of 49 in total

View Taxonomy