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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_1
R_WOR_2_45_21, WOR-2, Bacteria

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comp(57..593)
-----------------
DNA (537bp)
protein (179aa)
phosphatidylglycerophosphatase A ; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Phosphatidylglycerophosphatase A id=4705335 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
phosphatidylglycerophosphatase A
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_2
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(580..1173)
-----------------
DNA (594bp)
protein (198aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_02_FULL_W
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4705334 bin=GWC2_OP3_44_8 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_3
R_WOR_2_45_21, WOR-2, Bacteria

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comp(1248..2510)
-----------------
DNA (1263bp)
protein (421aa)
2-methylthioadenine synthetase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ribosomal protein S12 methylthiotransferase RimO id=4012149 bin=GWF2_OP3_43_52 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
2-methylthioadenine synthetase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_4
R_WOR_2_45_21, WOR-2, Bacteria

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comp(2542..3420)
-----------------
DNA (879bp)
protein (293aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Helix-turn-helix id=4012146 bin=GWF2_OP3_43_52 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_5
R_WOR_2_45_21, WOR-2, Bacteria

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comp(3423..5645)
-----------------
DNA (2223bp)
protein (741aa)
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Cell division FtsK/SpoIIIE id=4012143 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cell division protein FtsK/SpoIIIE
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_6
R_WOR_2_45_21, WOR-2, Bacteria

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comp(5655..7748)
-----------------
DNA (2094bp)
protein (698aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4948986 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_7
R_WOR_2_45_21, WOR-2, Bacteria

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comp(8066..8341)
-----------------
DNA (276bp)
protein (92aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
30S ribosomal protein S15 id=2219339 bin=GWB2_CP_45_9 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S15
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_8
R_WOR_2_45_21, WOR-2, Bacteria

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comp(8475..10937)
-----------------
DNA (2463bp)
protein (821aa)
diguanylate cyclase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Diguanylate cyclase and metal dependent phosphohydrolase id=4012059 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
diguanylate cyclase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_9
R_WOR_2_45_21, WOR-2, Bacteria

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10986..11642
-----------------
DNA (657bp)
protein (219aa)
type II secretion system subunit H, I, J Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type II secretion system subunit H, I id=4012057 bin=GWF2_OP3_43_52 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
type II secretion system subunit H, I, J
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_10
R_WOR_2_45_21, WOR-2, Bacteria

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11663..11890
-----------------
DNA (228bp)
protein (76aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L28 id=4012055 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L28
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_11
R_WOR_2_45_21, WOR-2, Bacteria

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comp(11877..13562)
-----------------
DNA (1686bp)
protein (562aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Single-stranded-DNA-specific exonuclease RecJ id=4192582 bin=GWC2_OP3_44_8 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
single-stranded-DNA-specific exonuclease RecJ
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_12
R_WOR_2_45_21, WOR-2, Bacteria

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comp(13562..15229)
-----------------
DNA (1668bp)
protein (556aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=4012048 bin=GWF2_OP3_43_52 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_13
R_WOR_2_45_21, WOR-2, Bacteria

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comp(15575..15730)
-----------------
DNA (156bp)
protein (52aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4012045 bin=GWF2_OP3_43_52 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_14
R_WOR_2_45_21, WOR-2, Bacteria

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comp(15876..16874)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4012042 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_15
R_WOR_2_45_21, WOR-2, Bacteria

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comp(16877..18313)
-----------------
DNA (1437bp)
protein (479aa)
Mg2+ transporter MgtE Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Magnesium transporter id=4012038 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Mg2+ transporter MgtE
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_16
R_WOR_2_45_21, WOR-2, Bacteria

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comp(18310..19575)
-----------------
DNA (1266bp)
protein (422aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
processing peptidase (EC:3.4.24.64)
Peptidase M16 domain protein id=1851657 bin=GWB2_CP_45_9 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_17
R_WOR_2_45_21, WOR-2, Bacteria

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comp(19550..20353)
-----------------
DNA (804bp)
protein (268aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain id=1851655 bin=GWB2_CP_45_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_18
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(20438..21622)
-----------------
DNA (1185bp)
protein (395aa)
tryptophan synthase subunit beta (EC:4.2.1.20) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=4011976 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_19
R_WOR_2_45_21, WOR-2, Bacteria

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comp(21637..22617)
-----------------
DNA (981bp)
protein (327aa)
protease htpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Protease HtpX homolog id=4011975 bin=GWF2_OP3_43_52 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
protease htpX
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_20
R_WOR_2_45_21, WOR-2, Bacteria

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comp(22661..23197)
-----------------
DNA (537bp)
protein (179aa)
nitroreductase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Nitroreductase id=4011972 bin=GWF2_OP3_43_52 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
nitroreductase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_21
R_WOR_2_45_21, WOR-2, Bacteria

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comp(23207..23578)
-----------------
DNA (372bp)
protein (124aa)
response regulator receiver domain-containing protein; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
COG0643: Chemotaxis protein histidine kinase and related kinases id=1851649 bin=GWB2_CP_45_9 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
response regulator receiver domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_22
R_WOR_2_45_21, WOR-2, Bacteria

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23907..25169
-----------------
DNA (1263bp)
protein (421aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division JS1 bacterium RepID=G3BMQ5_9BACT
putative transposase y4bF-like Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
integrase catalytic subunit
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_23
R_WOR_2_45_21, WOR-2, Bacteria

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comp(25233..26636)
-----------------
DNA (1404bp)
protein (468aa)
Putative RNA-processing exonuclease; K07576 metallo-beta-lactamase family protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative RNA-processing exonuclease id=4011968 bin=GWF2_OP3_43_52 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RNA-processing exonuclease
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_24
R_WOR_2_45_21, WOR-2, Bacteria

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comp(26633..27523)
-----------------
DNA (891bp)
protein (297aa)
Indole-3-glycerol phosphate synthase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Indole-3-glycerol phosphate synthase id=4011952 bin=GWF2_OP3_43_52 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Indole-3-glycerol phosphate synthase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_25
R_WOR_2_45_21, WOR-2, Bacteria

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comp(27533..28543)
-----------------
DNA (1011bp)
protein (337aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Anthranilate phosphoribosyltransferase id=4011949 bin=GWF2_OP3_43_52 species=unknown genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
anthranilate phosphoribosyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_26
R_WOR_2_45_21, WOR-2, Bacteria

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comp(28736..29341)
-----------------
DNA (606bp)
protein (202aa)
anthranilate synthase component II; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Glutamine amidotransferase of anthranilate synthase id=4011946 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
anthranilate synthase component II
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_27
R_WOR_2_45_21, WOR-2, Bacteria

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comp(29466..30599)
-----------------
DNA (1134bp)
protein (378aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4011943 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_28
R_WOR_2_45_21, WOR-2, Bacteria

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comp(30592..31404)
-----------------
DNA (813bp)
protein (271aa)
Methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Release factor glutamine methyltransferase id=4011941 bin=GWF2_OP3_43_52 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
methyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_29
R_WOR_2_45_21, WOR-2, Bacteria

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comp(31414..32484)
-----------------
DNA (1071bp)
protein (357aa)
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Peptide chain release factor 1 id=3874639 bin=GWF2_OP3_43_52 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
peptide chain release factor 1 (bRF-1)
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_7318_30
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists


comp(32558..32755)
-----------------
DNA (198bp)
protein (66aa)
LSU ribosomal protein L31P Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L31 id=2307093 bin=GWB2_CP_45_9 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
LSU ribosomal protein L31P
Displaying items 1-30 of 36 in total

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