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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_1
R_WOR_2_45_21, WOR-2, Bacteria

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comp(3..542)
-----------------
DNA (540bp)
protein (180aa)
Probable general secretion pathway protein k Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Probable general secretion pathway protein k id=4218940 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_2
R_WOR_2_45_21, WOR-2, Bacteria

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comp(487..1155)
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein id=4494110 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_3
R_WOR_2_45_21, WOR-2, Bacteria

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comp(1130..1543)
-----------------
DNA (414bp)
protein (138aa)
id=4218938 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=4218938 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_4
R_WOR_2_45_21, WOR-2, Bacteria

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comp(1503..1904)
-----------------
DNA (402bp)
protein (134aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
GspG1 id=4553171 bin=GWC2_OP3_44_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
general secretion pathway protein G
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_5
R_WOR_2_45_21, WOR-2, Bacteria

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comp(1921..2769)
-----------------
DNA (849bp)
protein (283aa)
id=4553170 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=4553170 bin=GWC2_OP3_44_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_6
R_WOR_2_45_21, WOR-2, Bacteria

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comp(2772..3509)
-----------------
DNA (738bp)
protein (246aa)
response regulator receiver protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative regulatory protein id=4218935 bin=GWF2_OP3_43_52 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
response regulator receiver protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_7
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(3506..5251)
-----------------
DNA (1746bp)
protein (582aa)
histidine kinase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Integral membrane sensor signal transduction histidine kinase id=4011974 bin=GWF2_OP3_43_52 species=Cyanobacterium aponinum genus=Cyanobacterium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
histidine kinase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_8
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(5260..5634)
-----------------
DNA (375bp)
protein (125aa)
response regulator receiver protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Response regulator receiver id=4218929 bin=GWF2_OP3_43_52 species=unknown genus=Arthrospira taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
family 3 adenylate cyclase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_9
R_WOR_2_45_21, WOR-2, Bacteria

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comp(5652..6914)
-----------------
DNA (1263bp)
protein (421aa)
general secretion pathway protein F; K02455 general secretion pathway protein F Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
General secretion pathway protein F id=4218922 bin=GWF2_OP3_43_52 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
general secretion pathway protein F
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_10
R_WOR_2_45_21, WOR-2, Bacteria

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comp(6943..9090)
-----------------
DNA (2148bp)
protein (716aa)
type II secretion system protein E (GspE) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type II secretion system protein E id=4218920 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
type II secretion system protein E (GspE)
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_11
R_WOR_2_45_21, WOR-2, Bacteria

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comp(9092..9574)
-----------------
DNA (483bp)
protein (161aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type II secretion system protein E (GspE) id=4218895 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_12
R_WOR_2_45_21, WOR-2, Bacteria

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comp(9589..11025)
-----------------
DNA (1437bp)
protein (479aa)
ATP synthase F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase subunit beta id=4218893 bin=GWF2_OP3_43_52 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATP synthase F1 subunit beta
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_13
R_WOR_2_45_21, WOR-2, Bacteria

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comp(10991..11863)
-----------------
DNA (873bp)
protein (291aa)
ATP synthase gamma chain Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase gamma chain id=4218891 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_14
R_WOR_2_45_21, WOR-2, Bacteria

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comp(11860..13341)
-----------------
DNA (1482bp)
protein (494aa)
proton translocating ATP synthase, F1 alpha subunit Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase subunit alpha id=4218889 bin=GWF2_OP3_43_52 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
proton translocating ATP synthase, F1 alpha subunit
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_15
R_WOR_2_45_21, WOR-2, Bacteria

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comp(13319..14047)
-----------------
DNA (729bp)
protein (243aa)
flagellar biosynthesis/type III secretory pathway protein; K02411 flagellar assembly protein FliH Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase F1 subunit delta id=4218887 bin=GWF2_OP3_43_52 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATP synthase subunit delta
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_16
R_WOR_2_45_21, WOR-2, Bacteria

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comp(14060..14272)
-----------------
DNA (213bp)
protein (71aa)
ATP synthase F0, C subunit Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase F0, C subunit id=4494098 bin=GWA2_OP3_53_43 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_17
R_WOR_2_45_21, WOR-2, Bacteria

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comp(14279..14509)
-----------------
DNA (231bp)
protein (77aa)
ATP synthase F1 sector epsilon subunit Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATP synthase F1 sector epsilon subunit id=4494061 bin=GWA2_OP3_53_43 species=Prevotella nigrescens genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_14190_18
R_WOR_2_45_21, WOR-2, Bacteria

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comp(14522..16111)
-----------------
DNA (1590bp)
protein (530aa)
diguanylate cyclase with PAS/PAC and GAF sensors Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
diguanylate cyclase with PAS/PAC and GAF sensors id=3773734 bin=GWA2_OP3_53_43 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Displaying 18 items

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