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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_1
R_WOR_2_45_21, WOR-2, Bacteria

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75..2027
-----------------
DNA (1953bp)
protein (651aa)
ABC transporter ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ABC transporter ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-)
ABC transporter related-protein id=4326263 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_2
R_WOR_2_45_21, WOR-2, Bacteria

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2288..2488
-----------------
DNA (201bp)
protein (67aa)
cspC_[H]; cold-shock DNA-binding domain protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Cold-shock DNA-binding domain protein id=2057374 bin=GWB2_CP_45_9 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cspC_[H]; cold-shock DNA-binding domain protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_3
R_WOR_2_45_21, WOR-2, Bacteria

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2566..2703
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_4
R_WOR_2_45_21, WOR-2, Bacteria

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2713..3396
-----------------
DNA (684bp)
protein (228aa)
RNA-binding region n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N310_ANATU
RNA-binding domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RNA-binding domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_5
R_WOR_2_45_21, WOR-2, Bacteria

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3424..3681
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Endo/excinuclease amino terminal domain protein id=2883631 bin=GWF2_OP3_43_52 species=Bermanella marisrubri genus=Bermanella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_6
R_WOR_2_45_21, WOR-2, Bacteria

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3678..3923
-----------------
DNA (246bp)
protein (82aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_7
R_WOR_2_45_21, WOR-2, Bacteria

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4344..4688
-----------------
DNA (345bp)
protein (115aa)
id=2883690 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=2883690 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_8
R_WOR_2_45_21, WOR-2, Bacteria

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4685..4933
-----------------
DNA (249bp)
protein (83aa)
DNA mismatch repair protein MutS n=1 Tax=Salinispora arenicola RepID=UPI00037F7082
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_9
R_WOR_2_45_21, WOR-2, Bacteria

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5098..6297
-----------------
DNA (1200bp)
protein (400aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DEAD/DEAH box helicase domain protein id=2883668 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATP-dependent RNA helicase RhlE
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_10
R_WOR_2_45_21, WOR-2, Bacteria

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6388..7197
-----------------
DNA (810bp)
protein (270aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Displaying 10 items

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