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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_1
R_WOR_2_45_21, WOR-2, Bacteria

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3..242
-----------------
DNA (240bp)
protein (80aa)
carbohydrate kinase-like protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ADP-dependent (S)-NAD(P)H-hydrate dehydratase id=4113517 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
carbohydrate kinase-like protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_trna_1
unknown

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291..363
-----------------
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_2
R_WOR_2_45_21, WOR-2, Bacteria

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comp(802..1365)
-----------------
DNA (564bp)
protein (188aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
2'-5' RNA ligase id=4113515 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
2'-5' RNA ligase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_3
R_WOR_2_45_21, WOR-2, Bacteria

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comp(1362..1829)
-----------------
DNA (468bp)
protein (156aa)
CinA; competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative competence-damage inducible protein id=4113514 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
CinA; competence damage-inducible protein A
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_4
R_WOR_2_45_21, WOR-2, Bacteria

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2107..3333
-----------------
DNA (1227bp)
protein (409aa)
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA id=4113513 bin=GWF2_OP3_43_52 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_5
R_WOR_2_45_21, WOR-2, Bacteria

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3461..3928
-----------------
DNA (468bp)
protein (156aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase, beta subunit (EC:2.5.1.9 2.5.1.78) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase, beta subunit (EC:2.5.1.9 2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase id=2198089 bin=GWB2_CP_45_9 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_6
R_WOR_2_45_21, WOR-2, Bacteria

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3971..4384
-----------------
DNA (414bp)
protein (138aa)
nusB; transcription antitermination factor NusB; K03625 N utilization substance protein B Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
N utilization substance protein B homolog id=4113511 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
nusB; transcription antitermination factor NusB
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_7
R_WOR_2_45_21, WOR-2, Bacteria

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4384..5202
-----------------
DNA (819bp)
protein (273aa)
putative metal-dependent phosphoesterase, PHP family Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
PHP domain protein id=2198091 bin=GWB2_CP_45_9 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
putative metal-dependent phosphoesterase, PHP family
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_8
R_WOR_2_45_21, WOR-2, Bacteria

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5177..6298
-----------------
DNA (1122bp)
protein (374aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD id=2198092 bin=GWB2_CP_45_9 species=unknown genus=Megamonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_9
R_WOR_2_45_21, WOR-2, Bacteria

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6298..6879
-----------------
DNA (582bp)
protein (194aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=2198093 bin=GWB2_CP_45_9 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31690_trna_2
unknown

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7097..7171
-----------------
DNA (75bp)
transferRNA
Displaying 11 items

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