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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_1
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(2..610)
DNA (609bp) protein (203aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4123606 bin=GWF2_OP3_43_52 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_2
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(693..1163)
DNA (471bp) protein (157aa)
nitrogen regulatory protein PtsN ; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Nitrogen regulatory protein PtsN id=1791208 bin=GWB2_CP_45_9 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
nitrogen regulatory protein PtsN
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_trna_3
unknown

Not on your lists

comp(1287..1359)
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_trna_2
unknown

Not on your lists

comp(1396..1479)
DNA (84bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_trna_1
unknown

Not on your lists

comp(1507..1579)
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_3
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(1646..2206)
DNA (561bp) protein (187aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ribosome-recycling factor id=4123602 bin=GWF2_OP3_43_52 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ribosome recycling factor
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_4
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(2307..3041)
DNA (735bp) protein (245aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase id=4123600 bin=GWF2_OP3_43_52 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_5
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(3098..3622)
DNA (525bp) protein (175aa)
translation elongation factor ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Elongation factor Ts id=1791193 bin=GWB2_CP_45_9 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
translation elongation factor ts
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_6
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists


comp(3619..4533)
DNA (915bp) protein (305aa)
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
30S ribosomal protein S2 id=4123596 bin=GWF2_OP3_43_52 species=Dialister succinatiphilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S2
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_7
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(4772..6568)
DNA (1797bp) protein (599aa)
ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ABC transporter id=4303019 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
phospholipid-lipopolysaccharide ABC transporter
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_8
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

6628..7551
DNA (924bp) protein (308aa)
mviM; dehydrogenase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Predicted dehydrogenase id=4303018 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
mviM; dehydrogenase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_9
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

7536..8663
DNA (1128bp) protein (376aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase id=4303017 bin=GWC2_OP3_44_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_10
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(8615..10231)
DNA (1617bp) protein (539aa)
ctp synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ctp synthase (EC:6.3.4.2)
CTP synthase id=4123581 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_11
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(10647..16064)
DNA (5418bp) protein (1806aa)
bifunctional phosphoglycerate kinase/triosephosphate isomerase (EC:2.7.2.3); K15330 phosphoglycerate kinase / triosephosphate isomerase [EC:2.7.2.3 5.3.1.1] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curate
Putative uncharacterized protein id=4884221 bin=GWC2_Planctomycete_KSU_39_26 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
triosephosphate isomerase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_12
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(16259..17725)
DNA (1467bp) protein (489aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase, small subunit id=4321231 bin=GWC2_OP3_44_8 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_13
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(17725..22446)
DNA (4722bp) protein (1574aa)
gltB; glutamate synthase subunit alpha (EC:1.4.1.13); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
Glutamate synthase (Ferredoxin) id=4123541 bin=GWF2_OP3_43_52 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_14
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(22759..23307)
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein id=2246685 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_15
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(23572..24546)
DNA (975bp) protein (325aa)
Csp231I DNA methyltransferase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4952350 bin=GWC2_Deltaproteobacteria_42_51 species=Ostreococcus lucimarinus virus OlV1 genus=Prasinovirus taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Csp231I DNA methyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_16
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(24554..25273)
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4952349 bin=GWC2_Deltaproteobacteria_42_51 species=Brachyspira hampsonii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_17
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(25659..26783)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6F40B
Appr-1-p processing domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Appr-1-p processing domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_18
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(26785..27180)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37093
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_19
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(27177..27407)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_20
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(27544..27717)
DNA (174bp) protein (58aa)
id=5096477 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=5096477 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_8751_21
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(27740..28384)
DNA (645bp) protein (215aa)
dinD; DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DNA-damage-inducible protein D id=4797976 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Acidithiobacillus sp. GGI-221 genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
dinD; DNA-damage-inducible protein D
Displaying 24 items

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