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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_1
R_WOR_2_45_21, WOR-2, Bacteria

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3..728
DNA (726bp) protein (242aa)
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type II secretion system protein E (GspE) id=3571977 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
general secretion pathway protein GspE
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_2
R_WOR_2_45_21, WOR-2, Bacteria

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731..1945
DNA (1215bp) protein (405aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type 4 fimbrial assembly protein pilC id=3571979 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
pilC; type 4 fimbrial assembly protein pilC
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_3
R_WOR_2_45_21, WOR-2, Bacteria

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1960..2430
DNA (471bp) protein (157aa)
hypothetical protein; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Tfp pilus assembly protein PilE-like id=3572138 bin=GWF2_OP3_43_52 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_4
R_WOR_2_45_21, WOR-2, Bacteria

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2405..2809
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=3572140 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_5
R_WOR_2_45_21, WOR-2, Bacteria

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2821..3384
DNA (564bp) protein (188aa)
id=3572142 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=3572142 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_6
R_WOR_2_45_21, WOR-2, Bacteria

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3381..4220
DNA (840bp) protein (280aa)
id=2886486 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=2886486 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_7
R_WOR_2_45_21, WOR-2, Bacteria

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4234..5802
DNA (1569bp) protein (523aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type IV pilus assembly protein PilM id=3572145 bin=GWF2_OP3_43_52 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
type IV pilus assembly protein PilM
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_8
R_WOR_2_45_21, WOR-2, Bacteria

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5799..6302
DNA (504bp) protein (168aa)
id=3572147 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=3572147 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_9
R_WOR_2_45_21, WOR-2, Bacteria

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6322..6729
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein id=2050210 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_10
R_WOR_2_45_21, WOR-2, Bacteria

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6732..7859
DNA (1128bp) protein (376aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Protein containing Cell wall hydrolase/autolysin, catalytic domain (Fragment) id=2050207 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_11
R_WOR_2_45_21, WOR-2, Bacteria

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7834..8628
DNA (795bp) protein (265aa)
murI; glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Glutamate racemase id=2050204 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
murI; glutamate racemase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_12
R_WOR_2_45_21, WOR-2, Bacteria

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8638..9027
DNA (390bp) protein (130aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=2886463 bin=GWC2_OP3_44_8 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_13
R_WOR_2_45_21, WOR-2, Bacteria

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9029..9709
DNA (681bp) protein (227aa)
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
7-cyano-7-deazaguanine synthase id=2886460 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
exsB protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_14
R_WOR_2_45_21, WOR-2, Bacteria

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9706..10374
DNA (669bp) protein (223aa)
Radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Organic radical activating enzyme id=2050198 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Radical SAM domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_15
R_WOR_2_45_21, WOR-2, Bacteria

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10371..10793
DNA (423bp) protein (141aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase id=2050115 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
NADPH-dependent 7-cyano-7-deazaguanine reductase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_16
R_WOR_2_45_21, WOR-2, Bacteria

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10804..11649
DNA (846bp) protein (282aa)
putative fumarate hydratase subunit alpha (EC:4.2.1.2) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
putative fumarate hydratase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit id=2886268 bin=GWC2_OP3_44_8 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_17
R_WOR_2_45_21, WOR-2, Bacteria

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11652..12137
DNA (486bp) protein (162aa)
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit id=2886265 bin=GWC2_OP3_44_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_18
R_WOR_2_45_21, WOR-2, Bacteria

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12130..12849
DNA (720bp) protein (240aa)
rph; ribonuclease PH (EC:2.7.7.56) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH id=3572156 bin=GWF2_OP3_43_52 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_19
R_WOR_2_45_21, WOR-2, Bacteria

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12846..13478
DNA (633bp) protein (211aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Non-canonical purine NTP pyrophosphatase id=3572157 bin=GWF2_OP3_43_52 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_20
R_WOR_2_45_21, WOR-2, Bacteria

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comp(13453..15993)
DNA (2541bp) protein (847aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=3706858 bin=GWF2_OP3_43_52 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_trna_1
unknown

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16199..16273
DNA (75bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_21
R_WOR_2_45_21, WOR-2, Bacteria

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16536..17018
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0003014B3B
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
conserved hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_22
R_WOR_2_45_21, WOR-2, Bacteria

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17024..18091
DNA (1068bp) protein (356aa)
id=3706863 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=3706863 bin=GWF2_OP3_43_52 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_trna_2
unknown

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18099..18172
DNA (74bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_5832_23
R_WOR_2_45_21, WOR-2, Bacteria

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comp(18110..18376)
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Displaying 25 items

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