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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_trna_1
unknown

Not on your lists

569..640
-----------------
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_trna_2
unknown

Not on your lists

661..734
-----------------
DNA (74bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_1
R_WOR_2_45_21, WOR-2, Bacteria

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759..1487
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein; K07164 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4012179 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_2
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

1484..2008
-----------------
DNA (525bp)
protein (175aa)
ribonuclease HI Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ribonuclease H id=4705376 bin=GWC2_OP3_44_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
ribonuclease HI
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_3
R_WOR_2_45_21, WOR-2, Bacteria

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2503..3387
-----------------
DNA (885bp)
protein (295aa)
cation efflux family protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Cation efflux transporter id=4012183 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cation efflux family protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_4
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

3468..4106
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=2273893 bin=GWB2_CP_45_9 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_5
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

4116..4301
-----------------
DNA (186bp)
protein (62aa)
ferredoxin Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative uncharacterized protein id=4012185 bin=GWF2_OP3_43_52 species=uncultured candidate division JS1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
fdx2; Fdx
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_6
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

4518..5528
-----------------
DNA (1011bp)
protein (337aa)
pyruvate-formate lyase-activating enzyme Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Uncharacterized protein MJ0808 id=4012187 bin=GWF2_OP3_43_52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
pyruvate-formate lyase-activating enzyme
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_7
R_WOR_2_45_21, WOR-2, Bacteria

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5525..7279
-----------------
DNA (1755bp)
protein (585aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
NH(3)-dependent NAD(+) synthetase id=4012189 bin=GWF2_OP3_43_52 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
NAD synthetase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_8
R_WOR_2_45_21, WOR-2, Bacteria

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7286..8521
-----------------
DNA (1236bp)
protein (412aa)
flavodoxin/nitric oxide synthase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Flavodoxin/nitric oxide synthase id=4012223 bin=GWF2_OP3_43_52 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
flavodoxin/nitric oxide synthase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_9
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

8478..9971
-----------------
DNA (1494bp)
protein (498aa)
Lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=4705385 bin=GWC2_OP3_44_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_10
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

9968..11146
-----------------
DNA (1179bp)
protein (393aa)
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Lipoprotein releasing system, transmembrane protein, LolC/E family id=4012227 bin=GWF2_OP3_43_52 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
lipoprotein releasing system transmembrane protein LolC/E family
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_11
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

11139..11885
-----------------
DNA (747bp)
protein (249aa)
lolD; ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ABC transporter related protein id=4012229 bin=GWF2_OP3_43_52 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
lolD; ABC transporter ATP-binding protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_12
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

11895..12764
-----------------
DNA (870bp)
protein (290aa)
branched chain amino acid aminotransferase apoenzyme; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme id=4012231 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_13
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

12782..13291
-----------------
DNA (510bp)
protein (170aa)
UvrB/UvrC protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
UvrB/UvrC protein id=4012232 bin=GWF2_OP3_43_52 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
UvrB/UvrC protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_14
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

13288..14352
-----------------
DNA (1065bp)
protein (355aa)
ATP:guanido phosphotransferase; K00936 [EC:2.7.3.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative ATP:guanido phosphotransferase kuste3072 id=4705390 bin=GWC2_OP3_44_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
ATP:guanido phosphotransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_15
R_WOR_2_45_21, WOR-2, Bacteria

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14345..16786
-----------------
DNA (2442bp)
protein (814aa)
chaperone ATPase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATPase AAA-2 domain protein id=4012237 bin=GWF2_OP3_43_52 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
chaperone ATPase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_16
R_WOR_2_45_21, WOR-2, Bacteria

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16813..17934
-----------------
DNA (1122bp)
protein (374aa)
id=4012239 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=4012239 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_17
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

17939..18721
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ABC-type transport system id=4012240 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_18
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

18774..19538
-----------------
DNA (765bp)
protein (255aa)
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ribonucleotide ABC transporter ATP-binding protein id=4705423 bin=GWC2_OP3_44_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
ABC transporter ATP-binding protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_19
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

19586..20248
-----------------
DNA (663bp)
protein (221aa)
Putative ABC transport system substrate-binding protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Protein containing Mammalian cell entry related domain id=4012244 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ABC transport system substrate-binding protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_20
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

20266..21636
-----------------
DNA (1371bp)
protein (457aa)
radA; DNA repair protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DNA repair protein radA id=4012246 bin=GWF2_OP3_43_52 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radA; DNA repair protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_21
R_WOR_2_45_21, WOR-2, Bacteria

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21665..22648
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Uncharacterized protein id=4012248 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_22
R_WOR_2_45_21, WOR-2, Bacteria

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22649..23389
-----------------
DNA (741bp)
protein (247aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=4012250 bin=GWF2_OP3_43_52 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_23
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

23488..23991
-----------------
DNA (504bp)
protein (168aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=2711595 bin=GWC2_OP3_44_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_24
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

24088..24777
-----------------
DNA (690bp)
protein (230aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase id=4012255 bin=GWF2_OP3_43_52 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_25
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

24774..26204
-----------------
DNA (1431bp)
protein (477aa)
PAS/PAC sensor protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative PAS/PAC sensor protein id=2285001 bin=GWB2_CP_45_9 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
PAS/PAC sensor protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_26
R_WOR_2_45_21, WOR-2, Bacteria

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26246..27775
-----------------
DNA (1530bp)
protein (510aa)
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Cysteine--tRNA ligase id=2285002 bin=GWB2_CP_45_9 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cysS; cysteinyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_27
R_WOR_2_45_21, WOR-2, Bacteria

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27757..28407
-----------------
DNA (651bp)
protein (217aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Thymidylate kinase id=2285003 bin=GWB2_CP_45_9 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
thymidylate kinase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1103_28
R_WOR_2_45_21, WOR-2, Bacteria

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28389..29354
-----------------
DNA (966bp)
protein (322aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit id=4012266 bin=GWF2_OP3_43_52 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Displaying items 1-30 of 59 in total

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