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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_1
R_WOR_2_45_21, WOR-2, Bacteria

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2..385
-----------------
DNA (384bp)
protein (128aa)
Ig family protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ig family protein id=4873762 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Ig family protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_2
R_WOR_2_45_21, WOR-2, Bacteria

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405..1232
-----------------
DNA (828bp)
protein (276aa)
PDZ/DHR/GLGF domain-containing protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FE37_DESAA
PDZ/DHR/GLGF domain-containing protein; K02452 general secretion pathway protein C Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
PDZ/DHR/GLGF domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_3
R_WOR_2_45_21, WOR-2, Bacteria

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1364..2680
-----------------
DNA (1317bp)
protein (439aa)
id=3690268 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
id=3690268 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_4
R_WOR_2_45_21, WOR-2, Bacteria

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2696..3223
-----------------
DNA (528bp)
protein (176aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_5
R_WOR_2_45_21, WOR-2, Bacteria

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3263..3706
-----------------
DNA (444bp)
protein (148aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_6
R_WOR_2_45_21, WOR-2, Bacteria

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3703..5190
-----------------
DNA (1488bp)
protein (496aa)
general secretion pathway protein D; K02453 general secretion pathway protein D Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Type II and III secretion system protein id=3686342 bin=GWF2_OP3_38_59 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
general secretion pathway protein D
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_7
R_WOR_2_45_21, WOR-2, Bacteria

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5187..5969
-----------------
DNA (783bp)
protein (261aa)
PDZ/DHR/GLGF domain protein n=4 Tax=Hydrogenobaculum RepID=M1REG8_9AQUI
PDZ/DHR/GLGF domain protein; K02452 general secretion pathway protein C Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
PDZ/DHR/GLGF domain protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_8
R_WOR_2_45_21, WOR-2, Bacteria

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5985..7640
-----------------
DNA (1656bp)
protein (552aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Putative General secretion pathway protein E (Type II traffic warden ATPase) id=3690255 bin=GWC2_OP3_44_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
type II secretion system protein E (GspE)
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_9
R_WOR_2_45_21, WOR-2, Bacteria

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7662..8861
-----------------
DNA (1200bp)
protein (400aa)
type II secretory pathway, component PulF Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
General secretion pathway protein F id=3690257 bin=GWC2_OP3_44_8 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
type II secretory pathway, component PulF
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_12783_10
R_WOR_2_45_21, WOR-2, Bacteria

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9145..10860
-----------------
DNA (1716bp)
protein (572aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Multi-sensor signal transduction histidine kinase id=4972222 bin=GWA2_OP3_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
integral membrane sensor signal transduction histidine kinase
Displaying 10 items

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