ggKbase home page

RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_4

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3737..4420)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 444
  • Evalue 1.10e-121
50S ribosomal protein L1 id=4218946 bin=GWF2_OP3_43_52 species=uncultured bacterium AOCefta2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 226.0
  • Bit_score: 351
  • Evalue 8.70e-94
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 223.0
  • Bit_score: 257
  • Evalue 3.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_WOR_2_45_21 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 684
ATGGCTAAAAAACGAAGTAAAAGATATAAAGAGGCTTTAAAGATTTTTGATGCGGATAAATCCTACACCCTTGCCGAGGCAATCGGTATTCTAAAGAAATTTGCCCCTACAAAATTTAATCAGACCGTGGGTATGAGTTTTTCTCTGAACATAGATCCCAAAAAAACTGACCAGTTAGTCCGGGGGACTGTGGCCTTGCCTCATGGCAGCGGAAAAACAGTGCGGGTGGCTGTTTTTTGTAAAGGCGAAGAAGAAAAAGAGGCAAAACAGGCAGGCGCTGATTTTGTAGGCGGCGCTGACTTAATTGAAAAGGTCAGCGAAGGATTTTTAGGTTTTGATGCCGCAGTTGCCACGCCTGAGATGATGAAGGATTTAAGCCGGCTGGGAAAAACCTTAGGCCCCCGAGGGCTTATGCCCAGCCCAAAAACCGGAACCGTCACCATGAATGTGGCGCAGGCAGTAAGGGAAATCAAGGGCGGTAAAATCGAATTCAAGGCTGATAAGCAGGCAGGGGTGCATGTGCCTGTAGGAAAAATCAATTTCAGCGAGAGCCAAATTTTAGAGAATGCATCTAAGGTTATTGAGGCGCTTAGCCAATCAAGGCCTCCGACAGTGAAGGGGCATTTTATCAAATCCTCATCCATTACTTGCACGATGAGCCCGGGCTTAAGATTAACGCTATGA
PROTEIN sequence
Length: 228
MAKKRSKRYKEALKIFDADKSYTLAEAIGILKKFAPTKFNQTVGMSFSLNIDPKKTDQLVRGTVALPHGSGKTVRVAVFCKGEEEKEAKQAGADFVGGADLIEKVSEGFLGFDAAVATPEMMKDLSRLGKTLGPRGLMPSPKTGTVTMNVAQAVREIKGGKIEFKADKQAGVHVPVGKINFSESQILENASKVIEALSQSRPPTVKGHFIKSSSITCTMSPGLRLTL*