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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_1
R_WOR_2_45_21, WOR-2, Bacteria

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comp(2..2704)
-----------------
DNA (2703bp)
protein (901aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase beta subunit id=2173723 bin=GWB2_CP_45_9 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_2
R_WOR_2_45_21, WOR-2, Bacteria

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comp(2808..3197)
-----------------
DNA (390bp)
protein (130aa)
ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L7/L12 id=4218948 bin=GWF2_OP3_43_52 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ribosomal protein L7/L12
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_3
R_WOR_2_45_21, WOR-2, Bacteria

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comp(3216..3740)
-----------------
DNA (525bp)
protein (175aa)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L10 id=4553189 bin=GWC2_OP3_44_8 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L10
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_4
R_WOR_2_45_21, WOR-2, Bacteria

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comp(3737..4420)
-----------------
DNA (684bp)
protein (228aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L1 id=4218946 bin=GWF2_OP3_43_52 species=uncultured bacterium AOCefta2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplA; 50S ribosomal protein L1
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_5
R_WOR_2_45_21, WOR-2, Bacteria

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comp(4509..4934)
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
50S ribosomal protein L11 id=4218945 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L11
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_6
R_WOR_2_45_21, WOR-2, Bacteria

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comp(4934..5464)
-----------------
DNA (531bp)
protein (177aa)
nusG; transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Transcription antitermination protein nusG id=4553183 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
nusG; transcription elongation factor NusG
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_7
R_WOR_2_45_21, WOR-2, Bacteria

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comp(5461..5724)
-----------------
DNA (264bp)
protein (88aa)
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Preprotein translocase subunit secE id=4218943 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
preprotein translocase subunit SecE
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_trna_2
unknown

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comp(5821..5891)
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_26721_trna_1
unknown

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comp(6351..6423)
-----------------
DNA (73bp)
transferRNA
Displaying 9 items

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