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RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_1
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(31..456)
-----------------
DNA (426bp)
protein (142aa)
Nuclease (SNase domain protein) id=1860618 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
nuclease (SNase domain protein) Tax=GWE2_Gallionellales_58_10_curated
nuclease (SNase domain protein)
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_2
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(453..956)
-----------------
DNA (504bp)
protein (168aa)
Phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=GWE2_Gallionellales_58_10_curated
Phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase id=1860620 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_3
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(940..2019)
-----------------
DNA (1080bp)
protein (360aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase id=1860622 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_4
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2166..2633)
-----------------
DNA (468bp)
protein (156aa)
NusB antitermination factor; K03625 N utilization substance protein B Tax=RBG_16_Gallionellales_57_15_curated
N utilization substance protein B homolog id=1860624 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
NusB antitermination factor
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_5
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2630..3082)
-----------------
DNA (453bp)
protein (151aa)
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_16_Gallionellales_57_15_curated
6,7-dimethyl-8-ribityllumazine synthase id=1860626 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
6,7-dimethyl-8-ribityllumazine synthase
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_6
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3130..4224)
-----------------
DNA (1095bp)
protein (365aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase id=1860628 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
3,4-dihydroxy-2-butanone 4-phosphate synthase
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_7
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4227..4823)
-----------------
DNA (597bp)
protein (199aa)
riboflavin synthase, subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
riboflavin synthase, subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=1860632 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_8
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4827..5921)
-----------------
DNA (1095bp)
protein (365aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJG0_GALCS
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_9
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5922..6404)
-----------------
DNA (483bp)
protein (161aa)
Transcriptional repressor NrdR n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNH8_SIDLE
ATP-cone domain protein; K07738 transcriptional repressor NrdR Tax=RBG_16_Gallionellales_57_15_curated
ATP-cone domain protein
RIFCSPHIGHO2_02_FULL_Betaproteobacteria_57_16_rifcsphigho2_02_scaffold_57898_10
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6479..6799)
-----------------
DNA (321bp)
protein (107aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNH7_SIDLE
Displaying 10 items

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