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RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3..776)
DNA (774bp) protein (258aa)
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL3_9BACT
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(893..1924)
DNA (1032bp) protein (344aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase id=4734414 bin=GWC2_Deltaproteobacteria_55_46 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1972..4827)
DNA (2856bp) protein (952aa)
Putative GAF sensor protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC3_GEOUR
putative GAF sensor protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative GAF sensor protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(5368..6072)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003619F23
hypothetical protein; K07164 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6098..6643)
DNA (546bp) protein (182aa)
Thiol-disulfide oxidoreductase ResA n=7 Tax=Bacillus cereus RepID=B7HKY2_BACC7
resA; thiol-disulfide oxidoreductase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
resA; thiol-disulfide oxidoreductase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6783..9794)
DNA (3012bp) protein (1004aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Spermine synthase id=4876746 bin=GWA2_OP3_52_12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
spermine synthase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9873..10973)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Virginiamycin B lyase (Modular protein) id=3235146 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Copper resistance protein CopC/CopD
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10970..12253)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003601196
putative hydrolase transmembrane protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative copper export protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_12578_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12336..13034)
DNA (699bp) protein (233aa)
id=4348688 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
id=4348688 bin=GWC2_Deltaproteobacteria_42_51 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Displaying 9 items

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