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RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2..253
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZ13_DICTD
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

294..887
DNA (594bp) protein (198aa)
Electron transport complex protein RnfA n=2 Tax=Azoarcus sp. (strain BH72) RepID=RNFA_AZOSB
rnfA1; electron transport complex protein RnfA; K03617 electron transport complex protein RnfA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
rnfA1; electron transport complex protein RnfA
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

953..1237
DNA (285bp) protein (95aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1212..1391
DNA (180bp) protein (60aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1563..2744)
DNA (1182bp) protein (394aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cell division protein FtsZ id=3884451 bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein FtsZ
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2842..4074)
DNA (1233bp) protein (411aa)
cell division protein FtsA n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035D4C38
cell division protein FtsA; K03590 cell division protein FtsA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ftsA; cell division protein FtsA
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4133..4999)
DNA (867bp) protein (289aa)
polypeptide-transport-associated domain-containing protein FtsQ-type; K03589 cell division protein FtsQ Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cell division protein FtsQ id=4938247 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
polypeptide-transport-associated domain-containing protein FtsQ-type
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(5010..6005)
DNA (996bp) protein (332aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase id=4938248 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6047..6982)
DNA (936bp) protein (312aa)
UDP-N-acetylmuramate dehydrogenase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2I6_THEOJ
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7021..8397)
DNA (1377bp) protein (459aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UDP-N-acetylmuramate--L-alanine ligase id=1823725 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
murC; UDP-N-acetylmuramate--L-alanine ligase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8402..9508)
DNA (1107bp) protein (369aa)
murG; UDP-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophospho
murG; UDP-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2130602 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9581..10672)
DNA (1092bp) protein (364aa)
Cell division protein FtsW n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YV55_9BACT
ftsW; cell division protein FtsW; K03588 cell division protein FtsW Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ftsW; cell division protein FtsW
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10752..12095)
DNA (1344bp) protein (448aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXA4_9CLOT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12195..13277)
DNA (1083bp) protein (361aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8L0_9BACT
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13282..14703)
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RifCSPlowO2_12_Nitrospinae_39_15
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T3E0_THEIA
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(14730..16253)
DNA (1524bp) protein (508aa)
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWJ1_HALOH
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(16250..18001)
DNA (1752bp) protein (584aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YV50_9BACT
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18006..18311)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVM7_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18379..19308)
DNA (930bp) protein (310aa)
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RSMH_HALOH
S-adenosyl-methyltransferase MraW
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(19313..19774)
DNA (462bp) protein (154aa)
Protein MraZ n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DA23_DESAJ
mraZ protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
mraZ protein
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

19948..20472
DNA (525bp) protein (175aa)
putative transposase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative insertion sequence transposase protein id=4916050 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
transposase
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

20560..20697
DNA (138bp) protein (46aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_23
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

20829..22238
DNA (1410bp) protein (470aa)
cytochrome c oxidase, subunit i Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Cytochrome c oxidase, subunit I id=4583993 bin=GWC2_Deltaproteobacteria_42_51 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cytochrome c oxidase, subunit i
RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(22252..22959)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI000380BC4B
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DNA repair protein RecO
Displaying 24 items

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