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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2..1162
-----------------
DNA (1161bp)
protein (387aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FY53_9BACT
Putative peptidase family M23/M37 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1206..2051
-----------------
DNA (846bp)
protein (282aa)
transmembrane_regions Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transmembrane_regions id=5226992 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_3
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2299..2562
-----------------
DNA (264bp)
protein (88aa)
transmembrane_regions 10..32 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transmembrane_regions 10..32 id=133579 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2587..2976
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XGX6_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(2991..3488)
-----------------
DNA (498bp)
protein (166aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3544..4545)
-----------------
DNA (1002bp)
protein (334aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

5024..5734
-----------------
DNA (711bp)
protein (237aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_8
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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6020..7564
-----------------
DNA (1545bp)
protein (515aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis F0566 RepID=U2K8C6_PORGN
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(7705..7914)
-----------------
DNA (210bp)
protein (70aa)
id=3676537 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
id=3676537 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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8237..10021
-----------------
DNA (1785bp)
protein (595aa)
GTP-binding protein TypA/BipA Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
GTP-binding protein typa; K06207 GTP-binding protein id=5803640 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GTP-binding protein TypA/BipA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_11

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11158..12111
-----------------
DNA (954bp)
protein (318aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5803652 bin=OD1_GWC2_34_28 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine-tRNA ligase {ECO:0000313|EMBL:KKR45596.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_12767_12
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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12099..12680
-----------------
DNA (582bp)
protein (194aa)
DEAD/DEAH box helicase domain protein; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
DEAD/DEAH box helicase domain-containing protein; K06877 DEAD/DEAH box helicase domain-containing protein id=5803653 bin=OD1_GWC2_34_28 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DEAD/DEAH box helicase domain protein
Displaying 12 items

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