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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_1

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3..197
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45304.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_2
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

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261..1085
DNA (825bp) protein (275aa)
id=3464816 Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
id=3464816 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_3
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1681..2376
DNA (696bp) protein (232aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Burkholderia sp. H160 RepID=B5WME3_9BURK
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2378..3277
DNA (900bp) protein (300aa)
prfB; peptide chain release factor 2, programmed frameshift; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=5803707 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptide chain release factor 2
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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3331..3573
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037246AE
transcriptional regulator/antitoxin MazE; K07172 antitoxin Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transcriptional regulator/antitoxin MazE
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_6

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3567..3905
DNA (339bp) protein (113aa)
Growth inhibitor n=1 Tax=Rhizobium sp. CF080 RepID=J2JWE8_9RHIZ
Growth inhibitor {ECO:0000313|EMBL:KKR31928.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
chpA; hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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3947..4627
DNA (681bp) protein (227aa)
ftsE; FtsE Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein id=5803704 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ftsE1; cell division ATP-binding protein FtsE
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_8
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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4647..5576
DNA (930bp) protein (310aa)
cell division protein; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
cell division protein; K09811 cell division transport system permease protein id=5803703 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsX
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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5620..7317
DNA (1698bp) protein (566aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase id=4087339 bin=GWA2_OP3_53_43 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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7373..7975
DNA (603bp) protein (201aa)
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=5803513 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Metal dependent phosphohydrolase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_11

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8138..8842
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR31933.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
hypothetical protein id=1730740 bin=GWA2_CPR4_42_17 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_trna_1
unknown

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8852..8922
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_12

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8866..9564
DNA (699bp) protein (233aa)
LemA family protein {ECO:0000313|EMBL:KKR31934.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
lema protein; K03744 LemA protein id=5090803 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_13

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9655..10521
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31935.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
hypothetical protein; K06872 uncharacterized protein id=5090804 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_14

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10540..11139
DNA (600bp) protein (200aa)
Diguanylate cyclase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7Y4_AMMDK
Diguanylate cyclase {ECO:0000313|EMBL:KKR45290.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
diguanylate cyclase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_15

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11149..11712
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45289.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
NUDIX hydrolase id=4948077 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_16

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11782..12330
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037F9280
Repressor in ring oxydation complex/ phenylacetic acid degradation pathway related protein (PaaX) {ECO:0000313|EMBL:KKR45288.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_17
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(12463..13791)
DNA (1329bp) protein (443aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
Recombinase Tax=GWC1_OD1_43_30
recombinase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_20398_trna_2
unknown

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12474..12558
DNA (85bp)
transferRNA
Displaying 19 items

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