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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1..420)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DU48_9BACT
plastocyanin Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Blue (Type 1) copper protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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462..911
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HWH5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_3

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911..1372
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45798.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Putative uncharacterized protein id=3305474 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_trna_1
unknown

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1433..1504
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1540..1803)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371EFDE
rpsT; ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
rpsT; ribosomal protein S20
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1856..2443
DNA (588bp) protein (196aa)
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=5803226 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2544..3479
DNA (936bp) protein (312aa)
fomramidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
fomramidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYA5_9BACT
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_7

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3508..4371
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45794.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
seg id=5803223 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_8

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comp(4456..4935)
DNA (480bp) protein (160aa)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:KKR45793.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
tRNA/rRNA methyltransferase SpoU id=5803222 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tRNA/rRNA methyltransferase SpoU
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(4943..5050)
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

5070..5423
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_11
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(5418..6257)
DNA (840bp) protein (280aa)
Marine sediment metagenome DNA, contig: S01H1_L00856 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_103054_trna_2
unknown

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comp(6309..6379)
DNA (71bp)
transferRNA
Displaying 13 items

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