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rifcsphigho2_02_scaffold_3700

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3700_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

454..1314
DNA (861bp) protein (287aa)
Hypothetical ATPase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L2R9_SIMNZ
putative ATPase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative ATPase
rifcsphigho2_02_scaffold_3700_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1292..1996)
DNA (705bp) protein (235aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] T
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B297_CLOA9
rifcsphigho2_02_scaffold_3700_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1984..2610)
DNA (627bp) protein (209aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Desulfotomaculum RepID=F6B7V3_DESCC
imidazole glycerol phosphate synthase subunit hisH
rifcsphigho2_02_scaffold_3700_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2601..3605)
DNA (1005bp) protein (335aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYI5_HALOH
rifcsphigho2_02_scaffold_3700_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3635..4201
DNA (567bp) protein (189aa)
Sporulation domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TR83_ALKMQ
sporulation domain-containing protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
sporulation domain-containing protein
rifcsphigho2_02_scaffold_3700_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4241..5287
DNA (1047bp) protein (349aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Rod shape-determining protein MreB id=2711334 bin=GWF2_OP9-related_38_17 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
rod shape-determining protein MreB
rifcsphigho2_02_scaffold_3700_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6035..6508
DNA (474bp) protein (158aa)
rod shape-determining protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rod shape-determining protein
rifcsphigho2_02_scaffold_3700_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6501..8348
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000362CD5B
cell elongation specific D,D-transpeptidase; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
cell elongation specific D,D-transpeptidase
rifcsphigho2_02_scaffold_3700_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


8392..9162
DNA (771bp) protein (257aa)
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=1249730 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
50S ribosomal protein L25
rifcsphigho2_02_scaffold_3700_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9240..10511
DNA (1272bp) protein (424aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_3700_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10515..10856
DNA (342bp) protein (114aa)
flhb domain protein; K04061 flagellar biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
flagellar biosynthesis protein id=1959901 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flhb domain protein
rifcsphigho2_02_scaffold_3700_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10905..11639
DNA (735bp) protein (245aa)
flagellar basal-body rod protein FlgF; K02392 flagellar basal-body rod protein FlgG Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF id=1817807 bin=GWD2_RBX1-related_39_127 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rifcsphigho2_02_scaffold_3700_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11652..12449
DNA (798bp) protein (266aa)
flagellar basal-body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Flagellar basal-body rod protein FlgG id=1959910 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar basal-body rod protein FlgG
rifcsphigho2_02_scaffold_3700_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12449..13153
DNA (705bp) protein (235aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HS24_PSEST
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
flagellar basal body P-ring biosynthesis protein FlgA
rifcsphigho2_02_scaffold_3700_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13150..13737
DNA (588bp) protein (196aa)
flagellar basal body L-ring protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Flagellar L-ring protein id=1959919 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar basal body L-ring protein
rifcsphigho2_02_scaffold_3700_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13748..14854
DNA (1107bp) protein (369aa)
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Flagellar P-ring protein id=1817828 bin=GWD2_RBX1-related_39_127 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flgI; flagellar P-ring protein FlgI
rifcsphigho2_02_scaffold_3700_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

14854..15156
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_3700_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

15153..15881
DNA (729bp) protein (243aa)
RNA polymerase sigma factor n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3A9_THEOJ
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
rifcsphigho2_02_scaffold_3700_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

15874..16173
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_3700_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16181..16618
DNA (438bp) protein (146aa)
Flagellar basal-body rod protein FlgC n=10 Tax=Thermoanaerobacter RepID=B0K1T3_THEPX
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
flagellar basal-body rod protein FlgC
rifcsphigho2_02_scaffold_3700_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16633..16989
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_3700_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

17005..18531
DNA (1527bp) protein (509aa)
Flagellar M-ring protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN42_9FIRM
fliF; flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
fliF; flagellar M-ring protein FliF
rifcsphigho2_02_scaffold_3700_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

18533..19000
DNA (468bp) protein (156aa)
id=1959948 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=1959948 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rifcsphigho2_02_scaffold_3700_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

19003..19665
DNA (663bp) protein (221aa)
flagellar assembly protein FliH/type III secretion system HrpE; K02411 flagellar assembly protein FliH Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
flagellar biosynthesis/type III secretory pathway protein-like protein id=1959950 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar assembly protein FliH/type III secretion system HrpE
rifcsphigho2_02_scaffold_3700_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

19674..20984
DNA (1311bp) protein (437aa)
ATPase, FliI/YscN family (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ATPase, FliI/YscN family (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] id=24609101 bin=RAAC11 species=Selenomonas flueggei genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ATPase, FliI/YscN family (EC:3.6.3.14)
rifcsphigho2_02_scaffold_3700_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21001..21474
DNA (474bp) protein (158aa)
Flagellar export protein FliJ Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Flagellar export protein FliJ id=1817875 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellar export protein FliJ
rifcsphigho2_02_scaffold_3700_27
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


comp(21471..21662)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Hippea alviniae RepID=UPI0003B5F6FE
50S ribosomal protein L28 ; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
50S ribosomal protein L28
rifcsphigho2_02_scaffold_3700_28
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21750..23786
DNA (2037bp) protein (679aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ATP-dependent DNA helicase RecG n=1 Tax=Thermincola potens (strain JR) RepID=D5X8R8_THEPJ
ATP-dependent DNA helicase RecG
rifcsphigho2_02_scaffold_3700_29
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

23998..24273
DNA (276bp) protein (92aa)
Methyltransferase n=4 Tax=Thermoanaerobacter RepID=E1T1B1_THESX
putative methyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
putative methyltransferase
rifcsphigho2_02_scaffold_3700_30
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

24248..24715
DNA (468bp) protein (156aa)
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S326_THEOJ
Displaying items 1-30 of 35 in total

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