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rifcsphigho2_02_scaffold_15690

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_15690_1
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(3..272)
DNA (270bp) protein (90aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_15690_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(362..1054)
DNA (693bp) protein (231aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
uroporphyrin-III C/tetrapyrrole methyltransferase
Ribosomal RNA small subunit methyltransferase I id=1935631 bin=GWD2_Nitrospirae-related_57_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rifcsphigho2_02_scaffold_15690_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1055..1471)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RBH8_THETN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_15690_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1476..2336)
DNA (861bp) protein (287aa)
peptidase, M23/M37 family Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
peptidase M23 id=24610947 bin=RAAC11 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
peptidase, M23/M37 family
rifcsphigho2_02_scaffold_15690_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2444..2551)
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_15690_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2548..4068)
DNA (1521bp) protein (507aa)
SNF family Na+-dependent transporter Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Sodium:neurotransmitter symporter family protein id=4430231 bin=GWF2_Planctomycete_41_51 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
SNF family Na+-dependent transporter
rifcsphigho2_02_scaffold_15690_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4065..5072)
DNA (1008bp) protein (336aa)
alcohol dehydrogenase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B74ACC
theronine dehydrogenase-like Zn-dependent dehydrogenase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
theronine dehydrogenase-like Zn-dependent dehydrogenase
rifcsphigho2_02_scaffold_15690_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5063..5845)
DNA (783bp) protein (261aa)
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme (EC:4.1.2.-)
fructose-bisphosphate aldolase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Fructose-1,6-biphosphate aldolase id=4287519 bin=GWF2_OP3_38_59 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rifcsphigho2_02_scaffold_15690_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6313..6912)
DNA (600bp) protein (200aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_15690_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7057..7296
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_15690_trna_1
unknown

Not on your lists

comp(7234..7307)
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_15690_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7699..8304)
DNA (606bp) protein (202aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=24419256 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acyl-phosphate glycerol 3-phosphate acyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
acyl-phosphate glycerol 3-phosphate acyltransferase
rifcsphigho2_02_scaffold_15690_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8309..8791)
DNA (483bp) protein (161aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Aspartokinase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E5X2_9FIRM
aspartate kinase
rifcsphigho2_02_scaffold_15690_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8803..9552)
DNA (750bp) protein (250aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Aspartokinase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT35_DESRL
aspartate kinase
rifcsphigho2_02_scaffold_15690_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9563..10255)
DNA (693bp) protein (231aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Pseudouridine synthase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA23_DESAA
pseudouridine synthase
rifcsphigho2_02_scaffold_15690_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10311..11129
DNA (819bp) protein (273aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_15690_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11142..11633
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036E72E5
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_15690_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11630..12814
DNA (1185bp) protein (395aa)
MiaB3; 2-methylthioadenine synthetase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=RIMO_THETN
MiaB3; 2-methylthioadenine synthetase
rifcsphigho2_02_scaffold_15690_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12802..13323
DNA (522bp) protein (174aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J1G7_9BACL
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
rifcsphigho2_02_scaffold_15690_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13284..13841
DNA (558bp) protein (186aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA id=7200168 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
competence/damage-inducible protein CinA
rifcsphigho2_02_scaffold_15690_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


13855..14850
DNA (996bp) protein (332aa)
Protein RecA n=7 Tax=Clostridium thermocellum RepID=A3DEA3_CLOTH
recA protein; K03553 recombination protein RecA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
recA protein
rifcsphigho2_02_scaffold_15690_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

14869..16416
DNA (1548bp) protein (516aa)
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribonuclease Y id=1792151 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2,3 cyclic-nucleotide 2-phosphodiesterase
rifcsphigho2_02_scaffold_15690_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16416..17201
DNA (786bp) protein (262aa)
Metallophosphoesterase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M1E2_9BACL
hypothetical protein; K09769 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_15690_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

17299..17433
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Displaying 24 items

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