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rifcsphigho2_02_scaffold_7789

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7789_1
R_WOR_1_53_15, WOR-1, Bacteria

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comp(1..162)
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
rifcsphigho2_02_scaffold_7789_2
R_WOR_1_46_20, WOR-1, Bacteria

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comp(193..1167)
DNA (975bp) protein (325aa)
VicK; signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Signal transduction histidine kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D189_PELTS
VicK; signal transduction histidine kinase
rifcsphigho2_02_scaffold_7789_3
R_WOR_1_46_20, WOR-1, Bacteria

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comp(1184..1861)
DNA (678bp) protein (226aa)
PhoP family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000289A79D
transcriptional regulatory protein; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
transcriptional regulatory protein
rifcsphigho2_02_scaffold_7789_4
R_WOR_1_46_20, WOR-1, Bacteria

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comp(1903..2868)
DNA (966bp) protein (322aa)
tRNA-U20-dihydrouridine synthase; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
tRNA-dihydrouridine synthase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QSY2_ACEAZ
tRNA-U20-dihydrouridine synthase
rifcsphigho2_02_scaffold_7789_5
R_WOR_1_46_20, WOR-1, Bacteria

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2946..4169
DNA (1224bp) protein (408aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
DEAD/DEAH box helicase domain protein id=4168278 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATP-dependent RNA helicase RhlE
rifcsphigho2_02_scaffold_7789_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4139..5422)
DNA (1284bp) protein (428aa)
glutamate synthase, NADH/NADPH, small subunit (EC:1.4.1.13); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
gltD; glutamate synthase small chain (EC:1.4.1.13)
Glutamate synthase, small subunit id=4321231 bin=GWC2_OP3_44_8 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rifcsphigho2_02_scaffold_7789_7
R_WOR_1_46_20, WOR-1, Bacteria

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comp(5426..9859)
DNA (4434bp) protein (1478aa)
glutamate synthase (EC:1.4.7.1); K00284 glutamate synthase (ferredoxin) [EC:1.4.7.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) id=4123541 bin=GWF2_OP3_43_52 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rifcsphigho2_02_scaffold_7789_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9925..11250)
DNA (1326bp) protein (442aa)
glutamine synthetase, type I; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Glutamine synthetase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6SWT6_9EURY
glnA2; glutamine synthetase GlnA2
rifcsphigho2_02_scaffold_7789_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(11442..11780)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Dehalococcoides mccartyi RepID=D2BIB1_DEHSV
glnK; nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
nitrogen regulatory protein P-II
rifcsphigho2_02_scaffold_7789_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(11795..13006)
DNA (1212bp) protein (404aa)
Ammonium transporter n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XJ61_CALS8
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ammonium transporter
rifcsphigho2_02_scaffold_7789_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(12999..13415)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000376E8A2
putative HD superfamily hydrolase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
putative HD superfamily hydrolase
rifcsphigho2_02_scaffold_7789_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(13494..14552)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Uncharacterized protein id=3144353 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Displaying 12 items

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