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rifcsphigho2_02_scaffold_7854

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7854_1
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2..2581)
DNA (2580bp) protein (860aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_7854_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3360..4577
DNA (1218bp) protein (406aa)
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; K01295 glutamate carboxypeptidase [EC:3.4.17.11] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZPJ6_THETH
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
rifcsphigho2_02_scaffold_7854_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4587..5873)
DNA (1287bp) protein (429aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5XD50_THEPJ
rifcsphigho2_02_scaffold_7854_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5870..7195)
DNA (1326bp) protein (442aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Single-stranded-DNA-specific exonuclease RecJ id=2178891 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
single-stranded-DNA-specific exonuclease RecJ
rifcsphigho2_02_scaffold_7854_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7153..7473)
DNA (321bp) protein (107aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN50_9BACT
single-stranded-DNA-specific exonuclease RecJ
rifcsphigho2_02_scaffold_7854_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7473..7889)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=24575889 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
rifcsphigho2_02_scaffold_7854_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7874..8545)
DNA (672bp) protein (224aa)
Iron-sulfur cluster-binding protein n=7 Tax=Clostridium thermocellum RepID=A3DEX2_CLOTH
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_7854_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8542..9414)
DNA (873bp) protein (291aa)
UbiA prenyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
UbiA prenyltransferase id=3709861 bin=GWF2_Lentisphaerae_52_8 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
UbiA prenyltransferase
rifcsphigho2_02_scaffold_7854_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9414..9848)
DNA (435bp) protein (145aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Pyruvate carboxylase subunit B n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EBA4_9FIRM
acetyl-CoA carboxylase biotin carboxyl carrier protein
rifcsphigho2_02_scaffold_7854_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9855..10523)
DNA (669bp) protein (223aa)
Elongation factor P n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FXG7_9LACO
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
efp; protein translation elongation factor P
rifcsphigho2_02_scaffold_7854_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(10690..11265)
DNA (576bp) protein (192aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_7854_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(11371..12624)
DNA (1254bp) protein (418aa)
pknL; Serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Serine/threonine protein kinase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V2A6_MYCFO
serine/threonine protein kinase
rifcsphigho2_02_scaffold_7854_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12803..13399
DNA (597bp) protein (199aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Selenomonas sp. CM52 RepID=J5V760_9FIRM
hypothetical protein
rifcsphigho2_02_scaffold_7854_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13392..14378
DNA (987bp) protein (329aa)
gpsA; glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=7200805 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
gpsA; glycerol-3-phosphate dehydrogenase
rifcsphigho2_02_scaffold_7854_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14400..15335)
DNA (936bp) protein (312aa)
family 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Glycosyl transferase family 2 n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GCN0_SPITZ
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_7854_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(15319..17373)
DNA (2055bp) protein (685aa)
Tetratricopeptide repeat protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FBE3_9DELT
membrane protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
membrane protein
rifcsphigho2_02_scaffold_7854_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17370..18167)
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=delta proteobacterium NaphS2 RepID=D8FBD9_9DELT
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_7854_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18164..20077)
DNA (1914bp) protein (638aa)
glycine--tRNA ligase (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5XAN8_THEPJ
rifcsphigho2_02_scaffold_7854_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(20086..20937)
DNA (852bp) protein (284aa)
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
glycyl-tRNA synthase subunit alpha n=1 Tax=Orenia marismortui RepID=UPI0003724A76
rifcsphigho2_02_scaffold_7854_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21172..21441
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_7854_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21404..22069
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6F102
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_7854_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

22096..23106
DNA (1011bp) protein (337aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Anthranilate phosphoribosyltransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD09_METIK
anthranilate phosphoribosyltransferase
rifcsphigho2_02_scaffold_7854_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

23118..23840
DNA (723bp) protein (241aa)
Sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter ATPase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative ABC transporter ATP-binding protein id=2966875 bin=GWF2_OP9_related_35_9 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
rifcsphigho2_02_scaffold_7854_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

23837..24928
DNA (1092bp) protein (364aa)
YjgP/YjgQ permease Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
YjgP/YjgQ permease
Permease YjgP/YjgQ family protein id=1960263 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rifcsphigho2_02_scaffold_7854_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

24928..25941
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:588 RepID=R7PSB1_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_7854_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

25938..26327
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI00034D706E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_7854_27
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26301..27680)
DNA (1380bp) protein (460aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Apolipoprotein N-acyltransferase n=2 Tax=Geobacter metallireducens RepID=LNT_GEOMG
lnt; apolipoprotein N-acyltransferase
rifcsphigho2_02_scaffold_7854_28
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(27680..28333)
DNA (654bp) protein (218aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_7854_29
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(28333..30741)
DNA (2409bp) protein (803aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036CB49D
hypothetical protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_7854_30
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(30749..33130)
DNA (2382bp) protein (794aa)
TPR repeats containing protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SLEI family protein id=1803900 bin=GWD2_RBX1-related_39_127 species=Tetrahymena thermophila genus=Tetrahymena taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
TPR repeats containing protein
Displaying items 1-30 of 48 in total

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