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RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_1
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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3..284
-----------------
DNA (282bp)
protein (94aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_2
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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305..700
-----------------
DNA (396bp)
protein (132aa)
Nuclear protein SET n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCR4_HYPSM
Nuclear protein SET; K07117 Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_3
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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1173..1607
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Protein MraZ id=2147848 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
cell division protein MraZ
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_4
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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1669..2538
-----------------
DNA (870bp)
protein (290aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Ribosomal RNA small subunit methyltransferase H id=2147847 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
mraW; S-adenosyl-methyltransferase MraW
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_5
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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2542..2877
-----------------
DNA (336bp)
protein (112aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_6
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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2898..4619
-----------------
DNA (1722bp)
protein (574aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase id=2147844 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_7
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

4708..6015
-----------------
DNA (1308bp)
protein (436aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofsk
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=2147843 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_trna_1
unknown

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6082..6156
-----------------
DNA (75bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_8
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(6179..6493)
-----------------
DNA (315bp)
protein (105aa)
50S ribosomal protein L21 n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036138DB
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
50S ribosomal protein L21
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_9
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(6720..7316)
-----------------
DNA (597bp)
protein (199aa)
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Recombination protein RecR id=2147835 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
recombination protein RecR
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_10
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7392..8789)
-----------------
DNA (1398bp)
protein (466aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
cth:Cthe_2256 primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.1.-] id=9392 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
primary replicative DNA helicase
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_11
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8945..10372)
-----------------
DNA (1428bp)
protein (476aa)
cysS; hypothetical protein; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
hypothetical protein, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FA1DA
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_12
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10369..11616)
-----------------
DNA (1248bp)
protein (416aa)
natural resistance-associated macrophage protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Natural resistance-associated macrophage protein id=2193218 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
natural resistance-associated macrophage protein
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_13
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11858..12592
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Transcriptional regulator of heat shock gene id=2193214 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_14
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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12712..13221
-----------------
DNA (510bp)
protein (170aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Protein GrpE id=2193213 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
GrpE protein HSP-70 cofactor
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_15
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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13286..15193
-----------------
DNA (1908bp)
protein (636aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Chaperone protein DnaK id=2193210 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
molecular chaperone DnaK
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_16
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

15230..16018
-----------------
DNA (789bp)
protein (263aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_17
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16111..16926
-----------------
DNA (816bp)
protein (272aa)
dnaJ; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Chaperone protein DnaJ id=2193208 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
molecular chaperone DnaJ
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_18
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16948..17517
-----------------
DNA (570bp)
protein (190aa)
id=2193206 Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
id=2193206 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_19
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17825..18184)
-----------------
DNA (360bp)
protein (120aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_20
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(18259..18831)
-----------------
DNA (573bp)
protein (191aa)
elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Elongation factor P id=2193204 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
elongation factor P
RIFCSPHIGHO2_02_FULL_OD1_46_19_rifcsphigho2_02_scaffold_4554_21
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(18849..19415)
-----------------
DNA (567bp)
protein (189aa)
ABC transporter permease; K09816 zinc transport system permease protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
ABC-3 protein id=2193194 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ABC transporter permease
Displaying 22 items

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