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RIFCSPHIGHO2_02_FULL_OD1_47_11_rifcsphigho2_02_scaffold_13981_24

Organism: Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11

near complete RP 41 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 9 / 38
Location: comp(19086..19754)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 185.0
  • Bit_score: 165
  • Evalue 5.10e-38
DNA-directed RNA polymerase subunit sigma similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 186.0
  • Bit_score: 104
  • Evalue 3.90e-20

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Taxonomy

R_RIF_OD1_13_47_11 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGATTGCGGTGCGCGAAACCGCCGTGTTCGCAGATTGGTTTTATAGATGGAGGGCGGTTTCTCGGGCGATTTCTATGGCAATCACGAATCGCGACGACAACGCATCACGAAACCCCTCCGACTTGAAAGATGAAGCAGTACTCGCACTTTCGCTCGGCGAGCCGGCCGCCTTTTCAATTTTGGTTGAGCGATATCAGTCTCCGCTTTTCCGCGCGGCTTTCAAAATCGTAAAAAGCCGCGAAGAGGCGGAAGATATCGTGCAGGAATCGTTCGTCAAAATATATAAAAACGCCGACAAATTCGAGAAACTTGAAGGCATTGAATTCAAATCATGGGCGTACAAGGTGACGATTAACACCGCGATTACGCACTACCGGAAGTTGAAGCGGGGCGAATTTCTTGCTGAAGACCCCTCCGTGTTTCAAGAAAACGACGAAGAGCCATGGGAGGCGCGTTTCTCTCTGGCAACGGACGCGAGGGCCGTGGTGGCGCGGATTCTTGAGAAAATGCCCCCGCACTTGCGTTCAGTGCTCCATCGCTACTATATGGAAGACAAATCGTATCAAACCATCGCAAAAGAAGAAAACATTTCCATACCAACGCTTAAAATGCGGCTCTTTCGCGCCAAAAAACTGTTTAAAAAATTAAGCGAAGACCCTAATCAATAA
PROTEIN sequence
Length: 223
MIAVRETAVFADWFYRWRAVSRAISMAITNRDDNASRNPSDLKDEAVLALSLGEPAAFSILVERYQSPLFRAAFKIVKSREEAEDIVQESFVKIYKNADKFEKLEGIEFKSWAYKVTINTAITHYRKLKRGEFLAEDPSVFQENDEEPWEARFSLATDARAVVARILEKMPPHLRSVLHRYYMEDKSYQTIAKEENISIPTLKMRLFRAKKLFKKLSEDPNQ*