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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_trna_1
unknown

Not on your lists

comp(102..172)
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(178..1062)
DNA (885bp) protein (295aa)
PPIC-type PPIASE domain-containing protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
PPIC-type PPIASE domain protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQC8_SPITD
PPIC-type PPIASE domain-containing protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1032..1403)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZK91_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1545..3323)
DNA (1779bp) protein (593aa)
Elongation factor 4 n=1 Tax=uncultured bacterium RepID=K2AQ03_9BACT
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
GTP-binding protein LepA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3413..7285)
DNA (3873bp) protein (1291aa)
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=14624267 bin=bin5_DeltaP species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
phosphoribosylformylglycinamide synthase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7431..7784)
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7901..8797)
DNA (897bp) protein (299aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahy
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=5226875 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9196..9705
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9754..11733)
DNA (1980bp) protein (660aa)
pbpA; putative peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
pbpA; putative peptidoglycan glycosyltransferase (EC:2.4.1.129)
hypothetical protein n=3 Tax=unclassified Parcubacteria RepID=UPI0003794254
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(11726..12226)
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12326..13120)
DNA (795bp) protein (265aa)
Cell shape-determining protein MreC n=1 Tax=uncultured bacterium RepID=K1ZSD1_9BACT
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
mreC; rod shape-determining protein MreC
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(13138..14196)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZ27_9BACT
mreB; Rod shape-determining protein MreB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
mreB; Rod shape-determining protein MreB
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(14245..15495)
DNA (1251bp) protein (417aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Prolyl-tRNA synthetase n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RVN3_9BACT
Prolyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(15498..16613)
DNA (1116bp) protein (372aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
membrane-associated zinc metalloprotease; K01417 [EC:3.4.24.-] id=9103 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(16610..17158)
DNA (549bp) protein (183aa)
frr; ribosome recycling factor (EC:3.6.5.3); K02838 ribosome recycling factor id=3019 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
frr; ribosome recycling factor
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(17161..18180)
DNA (1020bp) protein (340aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=9097 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(18177..18986)
DNA (810bp) protein (270aa)
DNA polymerase III subunit delta'''' n=1 Tax=[Clostridium] glycolicum RepID=UPI00036937A8
putative DNA polymerase III, delta' subunit Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA polymerase III subunit delta
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19056..19748)
DNA (693bp) protein (231aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19802..20923)
DNA (1122bp) protein (374aa)
putative glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Glycosyl transferase group 1 id=1264020 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
putative glycosyltransferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(20973..21986)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YTD6_9BACT
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rod shape-determining protein MreB
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(22014..23282)
DNA (1269bp) protein (423aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=uncultured bacterium RepID=K2D795_9BACT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

23359..24624
DNA (1266bp) protein (422aa)
transmembrane_regions 7..29 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 7..29 id=120410 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(24626..24871)
DNA (246bp) protein (82aa)
DUF149 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DUF149 id=133775 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(24883..25293)
DNA (411bp) protein (137aa)
ribonuclease H Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801655 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ribonuclease H
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(25347..27047)
DNA (1701bp) protein (567aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZKM2_9BACT
single-stranded-DNA-specific exonuclease RecJ
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(27040..28650)
DNA (1611bp) protein (537aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
phosphoglyceromutase (EC:5.4.2.1)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CTV7_9BACT
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(28647..29741)
DNA (1095bp) protein (365aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=bacterium JAD2 RepID=S4X357_9CHLR
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_27
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(29823..31013)
DNA (1191bp) protein (397aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_28
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(31049..31528)
DNA (480bp) protein (160aa)
Trp_repressor 20..100 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Trp_repressor 20..100 id=16491 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1549_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(31580..32029)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVN7_9SPHI
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying items 1-30 of 33 in total

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