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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

224..1252
DNA (1029bp) protein (343aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase id=3368754 bin=GWF2_Lentisphaerae_49_21 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

1249..2097
DNA (849bp) protein (283aa)
transaldolase family protein; K00616 transaldolase [EC:2.2.1.2] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dma:DMR_44980 transaldolase family protein; K00616 transaldolase [EC:2.2.1.2] id=71440 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
transaldolase family protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_3
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

2108..2842
DNA (735bp) protein (245aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2AIZ1_9BACT
putative glycosyltransferase Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
putative glycosyltransferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2858..4918
DNA (2061bp) protein (687aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin (Fragment) n=1 Tax=uncultured bacterium RepID=K1XRZ6_9BACT
peptidase S8 and S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative subtilase-family protease
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4937..6838
DNA (1902bp) protein (634aa)
Putative secreted protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative secreted protein id=2076415 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6931..7311
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7388..8788
DNA (1401bp) protein (467aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R1U2_METFO
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
polysaccharide biosynthesis protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8785..9645
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2K1_9BACT
glycosyl transferase family protein; K07011 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase family protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9672..11129
DNA (1458bp) protein (486aa)
transmembrane_regions 141..158 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 141..158 id=56216 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11110..12165
DNA (1056bp) protein (352aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase family protein id=5096865 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12247..13398
DNA (1152bp) protein (384aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase id=8267357 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13488..14336
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9L6K3_9BACL
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
family 2 glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14323..15573
DNA (1251bp) protein (417aa)
prc; carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Carboxyl-terminal protease n=1 Tax=uncultured bacterium RepID=K2DZ96_9BACT
peptidase S41
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15665..16012
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


16059..17771
DNA (1713bp) protein (571aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B0FAE
alanyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17797..18624
DNA (828bp) protein (276aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K06859 glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glucose-6-phosphate isomerase, archaeal (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGH8_9FIRM
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18632..19906
DNA (1275bp) protein (425aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative uncharacterized protein id=2628739 bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


20369..20764
DNA (396bp) protein (132aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsM; 30S ribosomal protein S13
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


20767..21195
DNA (429bp) protein (143aa)
30S ribosomal protein S11 n=1 Tax=uncultured bacterium RepID=K2BYK0_9BACT
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
30S ribosomal protein S11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


21198..21803
DNA (606bp) protein (202aa)
ribosomal protein S4P Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801918 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
rpsD; 30S ribosomal protein S4
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

21837..22778
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA-directed RNA polymerase, alpha subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=96114 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


22778..23122
DNA (345bp) protein (115aa)
LSU ribosomal protein l17p; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
50S ribosomal protein L17 id=3158431 bin=GWC1_CPR2_39_9 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L17
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


23124..23543
DNA (420bp) protein (140aa)
50S ribosomal protein L13 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSW9_TEPAE
rplM; ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rplM; ribosomal protein L13
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


23549..23998
DNA (450bp) protein (150aa)
30S ribosomal protein S9 n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX8_9DELT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rpsI; 30S ribosomal protein S9
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

24056..24343
DNA (288bp) protein (96aa)
DNA polymerase subunit beta; K07075 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein; K07075 id=5047486 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase subunit beta
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

24340..24549
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_27
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

24895..26019
DNA (1125bp) protein (375aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_28
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

26070..26618
DNA (549bp) protein (183aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTG9_METMA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

26615..28360
DNA (1746bp) protein (582aa)
DNA polymerase X family (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA polymerase X family (EC:2.7.7.7)
PHP domain protein id=2965910 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1360_30
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

28798..29526
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036E9BCA
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
decarboxylase
Displaying items 1-30 of 71 in total

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