ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(181..444)
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(536..817)
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(822..4001)
DNA (3180bp) protein (1060aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q178_9BACT
concanavalin A-like lectin/glucanase superfamily Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
concanavalin A-like lectin/glucanase superfamily
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4107..4481
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622DB7
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4499..4834
DNA (336bp) protein (112aa)
Rhodanese-like protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLC9_PLABD
rhodanese-like protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rhodanese-like protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5014..5319
DNA (306bp) protein (102aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
groES; co-chaperonin GroES; K04078 chaperonin GroES id=53261 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
groES; co-chaperonin GroES
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5338..7002
DNA (1665bp) protein (555aa)
chaperonin Cpn60 ; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801477 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
chaperonin Cpn60
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_8
Parcubacteria bacterium GW2011_GWA2_52_8, Parcubacteria, Bacteria

Not on your lists

7132..8322
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=uncultured bacterium RepID=K2BRA4_9BACT
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKW28823.1}; TaxID=1618857 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_52_8.;"
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(8447..8587)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8850..9266
DNA (417bp) protein (139aa)
DnaK suppressor protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0T4_9AQUI
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
TraR/DksA family transcriptional regulator
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9431..9706
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9829..10158
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


10499..10699
DNA (201bp) protein (67aa)
50S ribosomal protein L32 n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B68BDE
LSU ribosomal protein L32P Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rpmF; 50S ribosomal protein L32
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10703..11149
DNA (447bp) protein (149aa)
putative transcription termination factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nusB; N utilization substance protein B; K03625 N utilization substance protein B id=2882 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
putative transcription termination factor
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11212..11583
DNA (372bp) protein (124aa)
Transcriptional activator protein Irlr n=1 Tax=uncultured bacterium RepID=K2EZH3_9BACT
two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
two-component response regulator
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11672..13360
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CR62_9BACT
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
general secretory pathway protein E
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13357..14742
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DE79_9BACT
type II secretory pathway, component PulF Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
type II secretion system protein F
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14767..15444
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037FAB73
excinuclease abc c subunit domain protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
excinuclease abc c subunit domain protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15419..16912
DNA (1494bp) protein (498aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
LVIVD repeat-containing protein id=28160 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_17418_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16965..17234
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
Displaying 20 items

View Taxonomy