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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

585..905
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

905..2719
DNA (1815bp) protein (605aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
deg:DehalGT_0490 DNA primase; K02316 DNA primase [EC:2.7.7.-] id=67349 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA primase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2694..3953
DNA (1260bp) protein (420aa)
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=138208 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
RNA polymerase, sigma 38 subunit, RpoS
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3950..4276)
DNA (327bp) protein (109aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUP0_9GAMM
Pterin 4 alpha carbinolamine dehydratase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Pterin 4 alpha carbinolamine dehydratase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4273..4545)
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
ATP-cone id=5240959 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4550..5260)
DNA (711bp) protein (237aa)
cytochrome c biogenesis transmembrane protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis protein, transmembrane region id=14424177 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5263..5961)
DNA (699bp) protein (233aa)
hypothetical protein
alias=gwc1_scaffold_1147_10 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
alias=gwc1_scaffold_1147_10 id=14424176 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5985..6107)
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6192..6755)
DNA (564bp) protein (188aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
MgtE integral membrane protein; K06213 magnesium transporter id=5084824 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6742..9369)
DNA (2628bp) protein (876aa)
calcium-translocating P-type ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003825E53
calcium-translocating P-type ATPase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9366..11039)
DNA (1674bp) protein (558aa)
putative Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative Histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase id=3012971 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(11041..12099)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Nitroreductase id=3012966 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
flavin-dependent oxidoreductase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12108..13301)
DNA (1194bp) protein (398aa)
UBA/THIF-type NAD/FAD binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ThiF domain-containing protein id=15189723 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
UBA/THIF-type NAD/FAD binding protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(13305..14840)
DNA (1536bp) protein (512aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=15189724 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(14833..15882)
DNA (1050bp) protein (350aa)
ldh; leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ldh; leucine dehydrogenase (EC:1.4.1.9)
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein n=2 Tax=Caldanaerobacter subterraneus RepID=B7R8N3_9THEO id=75786 bin=ACD52 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_15080_16
unknown

Not on your lists

comp(15955..16095)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 16 items

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