ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_3

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_48_21

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 8 / 38
Location: comp(1266..1532)

Top 3 Functional Annotations

Value Algorithm Source
putative RNA-binding protein RbpA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 4.70e-41
rnp-1 like RNA-binding protein id=5098363 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 127
  • Evalue 6.10e-27
putative RNA-binding protein RbpA similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 85.0
  • Bit_score: 109
  • Evalue 6.30e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 267
GTGAACAAGAAACTCTACGTAGGGAATCTGCCCTACAAAACCACTAGCGACCAGCTCCAAGAGTTGTTCGCGCAGGCCGGCAGCGTAACCTCTGCCACCGTGATTTCCGACAAATTCTCAGGCCGTTCAAAAGGCTTTGGTTTTGTCGAAATGTCATCGGAAGACGAAGCCTCGAAAGCCATTAGCATGTTTAATGGCAACGAGATGGAAGGGCGCAAGCTGATCGTCAACGAAGCACGACCAGCAACCCCCCGCCCGATGAGGTAA
PROTEIN sequence
Length: 89
VNKKLYVGNLPYKTTSDQLQELFAQAGSVTSATVISDKFSGRSKGFGFVEMSSEDEASKAISMFNGNEMEGRKLIVNEARPATPRPMR*