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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1..552)
DNA (552bp) protein (184aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B76B31
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

719..1087
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1266..1532)
DNA (267bp) protein (89aa)
putative RNA-binding protein RbpA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rnp-1 like RNA-binding protein id=5098363 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
putative RNA-binding protein RbpA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1669..2136)
DNA (468bp) protein (156aa)
tRNA/rRNA methyltransferase (SpoU) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tRNA/rRNA methyltransferase SpoU id=15189825 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tRNA/rRNA methyltransferase (SpoU)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2155..2400)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2403..3272)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFW2_9BACT
Dgri_bt; GH24003 gene product from transcript GH24003-RA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative prophage LambdaBa04, tape measure protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3281..3619)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PKW5_9ZZZZ
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_trna_2
unknown

Not on your lists

comp(3962..4033)
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4084..4389)
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4399..4527)
DNA (129bp) protein (43aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4559..5212
DNA (654bp) protein (218aa)
flavodoxin reductase family protein
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5230..5376
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5479..5802)
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5852..7291
DNA (1440bp) protein (480aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Putative glycosyltransferase id=1924290 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_14
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

7296..8378
DNA (1083bp) protein (361aa)
glycosyl transferase group 1 Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
hypothetical protein id=5801652 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
group 1 glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8362..9465
DNA (1104bp) protein (368aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase group 1 id=95872 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
group 1 glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9462..10550
DNA (1089bp) protein (363aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
group 1 glycosyl transferase id=5090604 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
glycosyl transferase, group 1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10547..11653
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2169484 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11598..12581
DNA (984bp) protein (328aa)
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein; K07001 NTE family protein id=12496016 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
patatin
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12578..13324
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6C257
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13317..14573
DNA (1257bp) protein (419aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tte:TTE2575 murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=53758 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14577..15500
DNA (924bp) protein (308aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Geobacter sp. M18 RepID=C6MV99_9DELT id=36182 bin=ACD30 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15478..15906
DNA (429bp) protein (143aa)
Ribosomal subunit interface protein n=19 Tax=Francisella tularensis RepID=A4IX16_FRATW
yfiA; ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
yhbH; ribosome hibernation protein YhbH
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15975..17354
DNA (1380bp) protein (460aa)
arginine decarboxylase; K01585 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Arginine decarboxylase n=1 Tax=planctomycete KSU-1 RepID=I3IJ25_9PLAN
orn/dap/arg decarboxylase 2
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17365..18210
DNA (846bp) protein (282aa)
speB1; arginase (EC:3.5.3.1); K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
speB1; arginase (EC:3.5.3.1)
Arginase n=2 Tax=Pelagibacter ubique RepID=Q4FP61_PELUB
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_25
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

18212..19225
DNA (1014bp) protein (338aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
Deoxyhypusine synthase id=3730390 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
deoxyhypusine synthase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_26
R_SM2F11_48_13, SM2F11, Bacteria

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19229..19849
DNA (621bp) protein (207aa)
Acyl-CoA thioesterase I Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
GDSL-like Lipase/Acylhydrolase family protein id=1901318 bin=GWD2_Deltaproteobacteria_55_8 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GDSL family lipase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_27
R_SM2F11_48_13, SM2F11, Bacteria

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comp(20185..21489)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000372902F
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
peptidase M23
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_28
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(21509..22954)
DNA (1446bp) protein (482aa)
Glutamyl/glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Glutamate--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1YUS0_9BACT
glutamyl/glutaminyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1305_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(22963..23757)
DNA (795bp) protein (265aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
WecG; teichoic acid biosynthesis proteins; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] id=5802356 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Displaying items 1-30 of 46 in total

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