ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_1

Not on your lists

comp(2..808)
DNA (807bp) protein (269aa)
id=3544010 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08966.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_2

Not on your lists

comp(805..1824)
DNA (1020bp) protein (340aa)
FemAB family protein id=3544007 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
FemAB family protein {ECO:0000313|EMBL:KKW08965.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_3

Not on your lists

1846..2127
DNA (282bp) protein (94aa)
id=3543949 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08964.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_4

Not on your lists

comp(2186..3442)
DNA (1257bp) protein (419aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=3543948 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:KKW08963.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
degt/dnrj/eryc1/strs aminotransferase
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_5

Not on your lists

comp(3435..5117)
DNA (1683bp) protein (561aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3543947 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKW08962.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
MurF; UDP-N-acetylmuramyl pentapeptide synthase
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_6

Not on your lists

comp(5114..5890)
DNA (777bp) protein (259aa)
Possible alpha/beta hydrolase superfamily,slr1916 homolog id=3543946 bin=GWA1_ZB2_49_26 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Alpha/beta hydrolase {ECO:0000313|EMBL:KKW08961.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
alpha/beta hydrolase family protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_7

Not on your lists

comp(5865..7091)
DNA (1227bp) protein (409aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=3543945 bin=GWA1_ZB2_49_26 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Serine-tRNA ligase {ECO:0000313|EMBL:KKW08960.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_8
GWB1_OD1_49_12, Parcubacteria, Bacteria

Not on your lists

comp(7094..7432)
DNA (339bp) protein (113aa)
Putative uncharacterized protein id=3543942 bin=GWA1_ZB2_49_26 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Putative uncharacterized protein Tax=GWB1_OD1_49_12
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_9

Not on your lists

comp(7429..7785)
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=3543940 bin=GWA1_ZB2_49_26 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW14273.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_10

Not on your lists

comp(7905..8495)
DNA (591bp) protein (197aa)
id=3543938 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08957.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_11

Not on your lists

comp(8559..10049)
DNA (1491bp) protein (497aa)
Lysine--tRNA ligase id=3543936 bin=GWA1_ZB2_49_26 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Lysine-tRNA ligase {ECO:0000313|EMBL:KKW08956.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
lysS; lysyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_12

Not on your lists

comp(10131..10868)
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=3543934 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08955.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_13

Not on your lists

comp(11000..11830)
DNA (831bp) protein (277aa)
id=3543932 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08954.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_14

Not on your lists

comp(11903..12355)
DNA (453bp) protein (151aa)
Transcription elongation factor GreA id=3543930 bin=GWA1_ZB2_49_26 species=Lactobacillus salivarius genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Transcription elongation factor GreA {ECO:0000313|EMBL:KKW08953.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
transcription elongation factor GreA
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_15

Not on your lists

comp(12362..14302)
DNA (1941bp) protein (647aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase id=3543928 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KKW08952.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_16

Not on your lists

comp(14271..14582)
DNA (312bp) protein (104aa)
id=3543927 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08951.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_17

Not on your lists

comp(14579..15355)
DNA (777bp) protein (259aa)
Cell shape-determining protein MreC id=3543925 bin=GWA1_ZB2_49_26 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
MreC {ECO:0000313|EMBL:KKW08950.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
mreC; cell shape-determining protein MreC
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_6522_18
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15822..16013)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R6F6_9CLOT
RNAase {ECO:0000313|EMBL:KFZ39300.1}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
hypothetical protein
Displaying 18 items

View Taxonomy