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RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_1
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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263..469
DNA (207bp) protein (69aa)
helix-turn-helix domain-containing protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
transcriptional regulator, XRE family id=4712 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
regulatory protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_2
GWA2_OP11_47_11, Amesbacteria, Microgenomates, Bacteria

Not on your lists

478..978
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QWD6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKU56423.1}; TaxID=1618357 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_3
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1013..1600
DNA (588bp) protein (196aa)
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
Putative 3-methyladenine DNA glycosylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI0_NIAKG
3-methyladenine DNA glycosylase
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_4

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1601..1798
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS92719.1}; TaxID=1618826 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_5

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2043..2369
DNA (327bp) protein (109aa)
Putative uncharacterized protein id=3594576 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08364.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
DsrE family protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_6
GWC1_OD1_48_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2380..3039
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU92770.1}; TaxID=1619027 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC1_48_11.;"
Putative uncharacterized protein id=3594573 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_7

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3139..4092
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW13536.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
hypothetical protein CNitlB_11264 id=3594569 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_trna_1
unknown

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4149..4234
DNA (86bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_8
GWB1_OD1_49_12, Parcubacteria, Bacteria

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comp(4239..4877)
DNA (639bp) protein (213aa)
Amidophosphoribosyltransferase-like protein Tax=GWB1_OD1_49_12
Amidophosphoribosyltransferase-like protein id=3594566 bin=GWA1_ZB2_49_26 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
amidophosphoribosyltransferase-like protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_9

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4918..5970
DNA (1053bp) protein (351aa)
Type IV pilus biogenesis protein PilM id=3594563 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:KKW13538.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
pilM; type IV pilus biogenesis protein PilM
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_10

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5975..6508
DNA (534bp) protein (178aa)
id=3594561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08358.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_11

Not on your lists

6505..7032
DNA (528bp) protein (176aa)
id=3594559 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08357.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_12

Not on your lists

7037..7306
DNA (270bp) protein (90aa)
id=3594558 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08356.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_13

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7313..9052
DNA (1740bp) protein (580aa)
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKW13542.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
Type IV pilus assembly protein PilB id=3594555 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_14

Not on your lists

9049..9420
DNA (372bp) protein (124aa)
response regulator receiver protein id=3594553 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Response regulator receiver protein {ECO:0000313|EMBL:KKW08354.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
Two component transcriptional regulator, winged helix
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_15
GWB1_OD1_49_12, Parcubacteria, Bacteria

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9417..10508
DNA (1092bp) protein (364aa)
twitching motility protein Tax=GWB1_OD1_49_12
twitching motility protein id=3594551 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
twitching motility protein PilT
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_16

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10514..11728
DNA (1215bp) protein (405aa)
Type II secretion system F domain id=3594550 bin=GWA1_ZB2_49_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW13545.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
Type II secretion system F domain
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_17

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11857..12291
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=3594545 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08351.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_18

Not on your lists

12366..13202
DNA (837bp) protein (279aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme id=3594541 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Type 4 prepilin-like protein leader peptide-processing enzyme {ECO:0000313|EMBL:KKW08350.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_19

Not on your lists

13216..13506
DNA (291bp) protein (97aa)
id=3594484 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08349.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_20

Not on your lists

13539..13976
DNA (438bp) protein (146aa)
id=3594483 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08348.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_21

Not on your lists

13988..16153
DNA (2166bp) protein (722aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW08347.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
id=3594482 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_22

Not on your lists

16156..16893
DNA (738bp) protein (246aa)
id=3594481 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08346.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_23

Not on your lists

16890..17741
DNA (852bp) protein (284aa)
id=3594480 bin=GWA1_ZB2_49_26 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08345.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_24
GWB1_OD1_49_12, Parcubacteria, Bacteria

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17749..18330
DNA (582bp) protein (194aa)
id=3594479 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=GWB1_OD1_49_12
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_25

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18359..18757
DNA (399bp) protein (133aa)
id=3594478 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08343.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_26

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18754..20826
DNA (2073bp) protein (691aa)
DNA ligase, NAD-dependent (EC:6.5.1.2)
Ligase protein {ECO:0000313|EMBL:KKW08342.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
DNA ligase id=3594477 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_27
GWC1_OD1_48_11, Yanofskybacteria, Parcubacteria, Bacteria

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20793..21893
DNA (1101bp) protein (367aa)
Rod shape-determining protein RodA id=3594476 bin=GWA1_ZB2_49_26 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Rod shape-determining protein RodA {ECO:0000313|EMBL:KKU92749.1}; TaxID=1619027 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC1_48_11.;"
rod shape-determining protein RodA
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_28

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21982..22467
DNA (486bp) protein (162aa)
Filamentation induced by cAMP protein Fic id=3594475 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:KKW08340.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RIFCSPHIGHO2_02_FULL_OD1_49_17_rifcsphigho2_02_scaffold_2390_29

Not on your lists

22469..23332
DNA (864bp) protein (288aa)
DNA protecting protein DprA id=3594474 bin=GWA1_ZB2_49_26 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Protecting protein DprA protein {ECO:0000313|EMBL:KKW13558.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
DNA protecting protein DprA
Displaying items 1-30 of 34 in total

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