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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_1
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(2..559)
-----------------
DNA (558bp)
protein (186aa)
peptidase M23B id=5085427 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(588..1238)
-----------------
DNA (651bp)
protein (217aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(1269..1661)
-----------------
DNA (393bp)
protein (131aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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1792..2364
-----------------
DNA (573bp)
protein (191aa)
transmembrane_regions 24..43 id=4913 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(2327..2953)
-----------------
DNA (627bp)
protein (209aa)
UPF0278 protein HG1285_00735 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVW4_9AQUI id=4915 bin=ACD12 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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3046..3408
-----------------
DNA (363bp)
protein (121aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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3637..4950
-----------------
DNA (1314bp)
protein (438aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=5084574 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
dnaA; chromosomal replication initiation protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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5072..6172
-----------------
DNA (1101bp)
protein (367aa)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium RepID=K2F1Q0_9BACT
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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6211..6921
-----------------
DNA (711bp)
protein (237aa)
id=3895618 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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6988..7389
-----------------
DNA (402bp)
protein (134aa)
Transporter n=1 Tax=Pseudomonas putida CSV86 RepID=L1M2N5_PSEPU
urea transporter
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(7397..8263)
-----------------
DNA (867bp)
protein (289aa)
integrase family protein; K03733 integrase/recombinase XerC id=5947 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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8380..9516
-----------------
DNA (1137bp)
protein (379aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=5084691 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
30S ribosomal protein S1
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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9590..10444
-----------------
DNA (855bp)
protein (285aa)
seg 129..141 id=4584 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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10446..11099
-----------------
DNA (654bp)
protein (218aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS15_9BACT id=4583 bin=ACD12 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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11149..12912
-----------------
DNA (1764bp)
protein (588aa)
type IV secretory pathway VirB4 protein-like protein id=5084571 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(12902..13498)
-----------------
DNA (597bp)
protein (199aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(13529..14155)
-----------------
DNA (627bp)
protein (209aa)
Phosphoribosyltransferase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L837_SIMNZ
phosphoribosyltransferase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_trna_1
unknown

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14299..14371
-----------------
DNA (73bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

14539..14775
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CMA9_9BACT
excinuclease ABC subunit C
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

14779..15339
-----------------
DNA (561bp)
protein (187aa)
Putative methyladenine glycosylase n=1 Tax=uncultured marine microorganism HF4000_097M14 RepID=B3T1X1_9ZZZZ
DNA-3-methyladenine glycosylase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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15349..16200
-----------------
DNA (852bp)
protein (284aa)
transmembrane_regions 213..235 id=8012 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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16228..17202
-----------------
DNA (975bp)
protein (325aa)
UPF0052 protein CA_C0512 id=4120776 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(17180..17926)
-----------------
DNA (747bp)
protein (249aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(17923..18198)
-----------------
DNA (276bp)
protein (92aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_trna_2
unknown

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18265..18337
-----------------
DNA (73bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(18335..19867)
-----------------
DNA (1533bp)
protein (511aa)
anthranilate synthase component I (EC:4.1.3.27)
Fragment of Anthranilate synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EH65_9CHLR
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(19923..20582)
-----------------
DNA (660bp)
protein (220aa)
transcriptional regulator, Crp/Fnr family id=36367 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Crp/Fnr family transcriptional regulator
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_26
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

20769..21419
-----------------
DNA (651bp)
protein (217aa)
seg 66..77 id=35989 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_27
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

21416..21634
-----------------
DNA (219bp)
protein (73aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_38_28
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(21711..22244)
-----------------
DNA (534bp)
protein (178aa)
Displaying items 1-30 of 43 in total

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