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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0

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Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_1
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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1..2214
-----------------
DNA (2214bp)
protein (738aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
dly:Dehly_0790 phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5197 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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2219..3496
-----------------
DNA (1278bp)
protein (426aa)
enolase; K01689 enolase [EC:4.2.1.11] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
slp:Slip_1847 enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=68501 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
enolase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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3493..4071
-----------------
DNA (579bp)
protein (193aa)
holliday junction DNA helicase RuvA (EC:3.6.4.12) Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
holliday junction DNA helicase RuvA (EC:3.6.4.12)
Holliday junction DNA helicase, RuvA subunit; K03550 holliday junction DNA helicase RuvA id=5198 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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4108..5100
-----------------
DNA (993bp)
protein (331aa)
Holliday junction ATP-dependent DNA helicase ruvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=uncultured bacterium RepID=K2FTP3_9BACT
Holliday junction ATP-dependent DNA helicase ruvB
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_trna_1
unknown

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5137..5218
-----------------
DNA (82bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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5283..6374
-----------------
DNA (1092bp)
protein (364aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(6363..6815)
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1Z3C1_9BACT
NUDIX hydrolase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
NUDIX hydrolase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_trna_10
unknown

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comp(6791..6864)
-----------------
DNA (74bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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6965..8338
-----------------
DNA (1374bp)
protein (458aa)
L-threonine synthase (EC:4.2.3.1) Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L1C5_9BACE
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_trna_9
unknown

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comp(8343..8413)
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(8425..8841)
-----------------
DNA (417bp)
protein (139aa)
putative hydrolase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Putative uncharacterized protein id=3066453 bin=GWF2_Lentisphaerae_38_69 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
putative hydrolase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_trna_8
unknown

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comp(8843..8926)
-----------------
DNA (84bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(8955..10322)
-----------------
DNA (1368bp)
protein (456aa)
Extracellular solute-binding protein, family 5 n=1 Tax=uncultured bacterium RepID=K2F7T9_9BACT
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Extracellular solute-binding protein family 5
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(10319..10540)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FSV4_9BACT
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
secG; preprotein translocase, SecG subunit
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(10537..10935)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E6L7_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(10987..12282)
-----------------
DNA (1296bp)
protein (432aa)
excinuclease ABC subunit C ; K03703 excinuclease ABC subunit C Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
excinuclease ABC C subunit domain protein; K03703 excinuclease ABC subunit C id=5185 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Excinuclease ABC subunit C
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(12308..14119)
-----------------
DNA (1812bp)
protein (604aa)
hypothetical protein
seg 314..328 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
seg 314..328 id=4741 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(14136..17015)
-----------------
DNA (2880bp)
protein (960aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E6L0_9BACT
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
uvrA; UvrABC system protein A
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(17017..19083)
-----------------
DNA (2067bp)
protein (689aa)
UvrABC system protein B n=1 Tax=uncultured bacterium RepID=K2EWZ4_9BACT
UvrABC system protein B; K03702 excinuclease ABC subunit B Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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19778..20464
-----------------
DNA (687bp)
protein (229aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
methyltransferase (EC:2.1.1.-); K07056 id=4857 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
uroporphyrin-III C/tetrapyrrole methyltransferase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(20454..21503)
-----------------
DNA (1050bp)
protein (350aa)
Predicted oxidoreductase (Related to aryl-alcohol dehydrogenase) n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SL81_HAHCH
aryl-alcohol dehydrogenase-like oxidoreductase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
aryl-alcohol dehydrogenase-like oxidoreductase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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21552..21782
-----------------
DNA (231bp)
protein (77aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_trna_7
unknown

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comp(21820..21893)
-----------------
DNA (74bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(21978..22628)
-----------------
DNA (651bp)
protein (217aa)
CmpX protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
seg 25..40 id=5130 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
CmpX protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(22652..23017)
-----------------
DNA (366bp)
protein (122aa)
UPF0102 protein ACD_37C00477G0001 n=1 Tax=uncultured bacterium RepID=K2CY09_9BACT
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
endonuclease
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(23014..23346)
-----------------
DNA (333bp)
protein (111aa)
ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=5145 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
50S ribosomal protein L19
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(23366..25024)
-----------------
DNA (1659bp)
protein (553aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
tte:TTE2609 pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=72126 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
CTP synthase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(25021..27048)
-----------------
DNA (2028bp)
protein (676aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PI89_9PROT id=5144 bin=ACD12 species=Campylobacter gracilis genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(27101..27520)
-----------------
DNA (420bp)
protein (140aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
ATP synthase epsilon chain n=1 Tax=uncultured bacterium RepID=K2E644_9BACT
ATP synthase subunit epsilon
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_0_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(27524..28903)
-----------------
DNA (1380bp)
protein (460aa)
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
pca:Pcar_3131 atpD-3; F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] id=5077 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14)
Displaying items 1-30 of 230 in total

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