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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_1
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(7..999)
-----------------
DNA (993bp)
protein (331aa)
Predicted hydrolase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZL9_PELTS
ComEC; hydrolase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

1064..1642
-----------------
DNA (579bp)
protein (193aa)
id=5086650 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

1639..2187
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00036B1E20
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

2337..2888
-----------------
DNA (552bp)
protein (184aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3132..4094
-----------------
DNA (963bp)
protein (321aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

4214..4690
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FWD9_9BACT
EbsC; hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

4687..5415
-----------------
DNA (729bp)
protein (243aa)
Predicted protein id=2775131 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

5428..6144
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A53A1
Glycosyl transferase family 2
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

6141..6575
-----------------
DNA (435bp)
protein (145aa)
NUDIX hydrolase id=4983 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
MutT/nudix family protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

6641..7189
-----------------
DNA (549bp)
protein (183aa)
seg 20..31 id=71927 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_trna_1
unknown

Not on your lists

7242..7314
-----------------
DNA (73bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

7350..7601
-----------------
DNA (252bp)
protein (84aa)
GIY-YIG catalytic domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VSS8_9CYAN
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_trna_2
unknown

Not on your lists

7648..7720
-----------------
DNA (73bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(7690..8946)
-----------------
DNA (1257bp)
protein (419aa)
Permease n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11Y31_CYTH3
permease
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_trna_3
unknown

Not on your lists

8988..9058
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

9113..10390
-----------------
DNA (1278bp)
protein (426aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(10382..11167)
-----------------
DNA (786bp)
protein (262aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=32383 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
inositol-phosphate phosphatase (EC:3.1.3.25)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_trna_5
unknown

Not on your lists

comp(11225..11295)
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_trna_4
unknown

Not on your lists

comp(11302..11375)
-----------------
DNA (74bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(11492..12268)
-----------------
DNA (777bp)
protein (259aa)
putative undecaprenol kinase (EC:2.7.1.66)
Undecaprenyl-diphosphatase n=1 Tax=uncultured bacterium RepID=K2FTK1_9BACT
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

12338..13450
-----------------
DNA (1113bp)
protein (371aa)
glycosyl transferase, group 1 id=67406 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
glycosyl transferase group 1
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(13456..14664)
-----------------
DNA (1209bp)
protein (403aa)
protein of unknown function DUF214; K02004 id=66829 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
ABC-type antimicrobial peptide transport system, permease component
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14661..15329)
-----------------
DNA (669bp)
protein (223aa)
macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
ABC transporter ATP-binding protein; K02003 id=3779 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(15322..16383)
-----------------
DNA (1062bp)
protein (354aa)
acrA; membrane-fusion protein; K02005 HlyD family secretion protein id=5084184 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
secretion protein HlyD
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(16385..16804)
-----------------
DNA (420bp)
protein (140aa)
MarR family transcriptional regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZIX4_9BACT
MarR family transcriptional regulator
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(16865..17998)
-----------------
DNA (1134bp)
protein (378aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FTT2_9BACT
membrane protein of unknown function
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

18023..19486
-----------------
DNA (1464bp)
protein (488aa)
transmembrane_regions 311..328 id=4963 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Glycosyl transferase family 39
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

19488..20234
-----------------
DNA (747bp)
protein (249aa)
glycosyl transferase family protein id=4146 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
glycosyl transferase family protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

20241..21755
-----------------
DNA (1515bp)
protein (505aa)
dolichyl-phosphate-mannose-protein mannosyltransferase family protein id=5084244 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
glycosyl transferase family protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_4_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(21752..22678)
-----------------
DNA (927bp)
protein (309aa)
glycosyl transferase family protein id=5289 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
glycosyl transferase family protein
Displaying items 1-30 of 73 in total

View Taxonomy