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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_1
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(25..468)
-----------------
DNA (444bp)
protein (148aa)
cupin domain-containing protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
cupin domain-containing protein id=3856 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
cupin domain-containing protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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515..1435
-----------------
DNA (921bp)
protein (307aa)
UbiA prenyltransferase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase id=3870 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
UbiA prenyltransferase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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1469..1567
-----------------
DNA (99bp)
protein (33aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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1658..2833
-----------------
DNA (1176bp)
protein (392aa)
major facilitator superfamily MFS_1 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Major facilitator superfamily MFS_1 id=2583212 bin=GWF2_CPR3_35_18 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWF2_CPR3_35_18 organism_group=CPR3
major facilitator superfamily MFS_1
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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2932..3960
-----------------
DNA (1029bp)
protein (343aa)
Protein RecA n=1 Tax=uncultured bacterium RepID=K2EXI9_9BACT
recA; recombinase A; K03553 recombination protein RecA Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
recA; recombinase A
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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3960..4451
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein; K03565 regulatory protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
regulatory protein RecX; K03565 regulatory protein id=3860 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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4609..5817
-----------------
DNA (1209bp)
protein (403aa)
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
has:Halsa_1274 metal dependent phosphohydrolase; K06950 id=3871 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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5860..6417
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein id=91967 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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6663..6935
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E9S2_9BACT
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
histone family protein DNA-binding protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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7055..7600
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0R8_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(7574..8806)
-----------------
DNA (1233bp)
protein (411aa)
O-Antigen Polymerase family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VJ67_9CYAN id=72201 bin=ACD50 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
O-antigen ligase-related protein
O-Antigen Polymerase family Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(8754..10097)
-----------------
DNA (1344bp)
protein (448aa)
DNA and RNA helicase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
UvrD/REP helicase id=5084629 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
DNA and RNA helicase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(10155..10451)
-----------------
DNA (297bp)
protein (99aa)
Excinuclease ABC, C subunit-like protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=86628 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Excinuclease ABC, C subunit-like protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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10680..11102
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein id=14632558 bin=bin9_gal15 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=bin9_gal15 organism_group=GAL15
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(11453..12076)
-----------------
DNA (624bp)
protein (208aa)
HAD family hydrolase; K06019 pyrophosphatase PpaX [EC:3.6.1.1] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
HAD-superfamily hydrolase, subfamily IA n=9 Tax=Candidatus Arthromitus RepID=F9VLD4_ARTSS id=5087710 bin=OP11_3 species=unknown genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
pyrophosphatase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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12140..12505
-----------------
DNA (366bp)
protein (122aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(12507..12824)
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=40913 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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12856..13320
-----------------
DNA (465bp)
protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured bacterium RepID=K2E751_9BACT
GCN5-related N-acetyltransferase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
N-acetyltransferase GCN5
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(13317..14828)
-----------------
DNA (1512bp)
protein (504aa)
hypothetical protein; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] id=5044616 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ketol-acid reductoisomerase (EC:1.1.1.86)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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14911..15216
-----------------
DNA (306bp)
protein (102aa)
Zinc finger UBP-type protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5Y1_9CHLR
Zn-finger-containing protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Zn-finger-containing protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(15202..15684)
-----------------
DNA (483bp)
protein (161aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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15759..16490
-----------------
DNA (732bp)
protein (244aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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16666..17091
-----------------
DNA (426bp)
protein (142aa)
NUDIX hydrolase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCN7_9CLOT
NUDIX hydrolase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
NUDIX hydrolase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(17930..18382)
-----------------
DNA (453bp)
protein (151aa)
SsrA-binding protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FWU7_9BACT
SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
SsrA-binding protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(18379..18837)
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1D3_9BACT
GCN5-like N-acetyltransferase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
GCN5-like N-acetyltransferase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_26
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(18858..20270)
-----------------
DNA (1413bp)
protein (471aa)
glycoside hydrolase family protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
glycoside hydrolase family protein id=3666 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_27
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

20361..20585
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIH3_9BACT
repressor protein; K07729 putative transcriptional regulator Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
repressor protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_28
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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20575..20940
-----------------
DNA (366bp)
protein (122aa)
seg 99..109 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
seg 99..109 id=42889 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_29
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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20956..21537
-----------------
DNA (582bp)
protein (194aa)
thioredoxin protein
id=5044456 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
id=5044456 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_242_30
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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21534..23288
-----------------
DNA (1755bp)
protein (585aa)
UniRef90_A6UKB8 Redoxin domain protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UKB8_SINMW id=42875 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein
Displaying items 1-30 of 44 in total

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