ggKbase home page

RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_10

Organism: Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_41_18

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 ASCG 9 / 38
Location: 5915..8188

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein id=3561 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 762.0
  • Bit_score: 609
  • Evalue 3.50e-171
GDP-mannose 4,6 dehydratase ISS similarity KEGG
DB: KEGG
  • Identity: 27.1
  • Coverage: 704.0
  • Bit_score: 208
  • Evalue 8.60e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OP11_Roizmanbacteria_41_18 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 2274
ATGAAGCTCGTTGTTCAGGAATCAGAAAGAAAACAAGAGATTCTTCTGGTGGATGAAAAATTTACTCCTCTTGGAAAAATACTAAAGGAGGAGTTGAAAAAGTATGACAGCACTGTTTACGTCTCTCCCCACCTTCCTGCCAAAACCGACCGTTTTGCCTACATTTTTATCGTAAATAAGCGGAGGGAGGATCTTACGCTTTCGATCCAAAAAAAACAGCGAGTTATTTTTATTTTTATTCAGAAAAAAAAGTGGGCTGAAGAGCTCACGTCTTTTGTACGGTCCCGCCGTCTGGGAAACGTGAAAATAGTATCGGTCAATTCTCCCTATCTTGATCAAAGCGATCTGGAAAAACTTTTTTGGTTTTCTTTTTCAAAAAGCAGGGAAGTATTTTTTAAGTTTGACGACCGAGAGCGCCATTCGAAAGAACCGGTGGTTAAAAAACAATTAACTCCACTTAGAAATTTTCCATTTTTTACAAAAAAACAGCTTTTTCTTCTCTTCCTTTTATTATTTGTACTCTACCATCTCCTCATCTTTCCTCCGCTTTTTCTTTCCTCATTTTTTATTTACAGATCGGCTCAAACATTTAAAGATGGTCAACTCGACAAAGCAAAACAGACGCTGAAAATCGCTGAAAATCTTGAAAACACCGGTAAAGCCTTTTATTCGTTTTCACGACCAAGCTATCTTCTTTTTTCTCTTGCTCTTTTTTCCGATACATTAGTCGATGTAAACGATAAGGCCATCGAGACGTTGGATAAAACTTACATTTCGTATGAAAATTCACGCAATATCATGTCTTTGGTTTTTGAGAAGGGAAAAACCGAGGAAGAAAAGGGACTACTTGAAGCACGACTGGCGAAACTGAAAGAAAATATTAGTGACATTAAAAACAATCTAATTTTTCTCGATCAAAAGCTGGCTGATCTCCCATTTGGACTTGCTAATACCTATCGGAAAGATCTTTCAAAAAGTGTGGAACTTATCGTCAAGGCGGATAATATCCTTCCTTTTACCGATAAATTATTAGCCAAAGGAAAAGAAATGAAATACCTGCTGCTTTTTGCAAACAATATGGAGCTTAGGCCGGGTGGAGGTTTTATCGGCTCGTTTGGCGTCTTAACTATGAAAGATCTAACTCTTGAAAATATTCAAGTCTATGATGTCTATGACGCTGATGGACAACTTCTCAATCATGTAACGCCTCCTGAACCTATACGGAAGTATCTAAATCAACCGCACTGGTTTTTAAGGGATTCGGCATTTTCACCGGATTTTTACGACAACTACAATCAGGCTAAATTTTTTCTCGATCAGGAATTAAAACTTGGCGATTTTTCCGGAGGAATACTTATTACAACAACAGCGATTCAACATCTTTTAGATGCATATGGACAGATTCATCTTCCTGATTTTAACGAACAGATAAATAAAGATAATTTTTACTTGAAAGCCCAGTATTACGCTGAGAAAAATTTCTTTCCCGGCTCAATTCAGAAAAAAAGTTTCTTAGGATCTGTTGCCGATCAGATAATTCTTAATGTGGATGATGTTTCCCCTGCCAAACTTTTGCAAAATGTAAAAAAATCTTTTGACGAAAAACAAATGACGATTTTGGTGGATGATCCTGAAATCCAGCGGGTATTTGATGCTTTGTATTGGTCGGGTAAAACGATTATACCCCGCTGTGCAATACAAACTCAAAACTGTGTTATTGATTACGTCTTTCCTATTGATGCAAATCTCGGTGTCAATAAAGCAAATTTTTTCGTTTCACGGCTATTAACTCAGAGAGTAAATATTGGCGAGGATGGCAAAATCGTTAGTAATCTTTTTGTAAAACTGAAAAACGATTCCCCAAATGAAGCTTTTCCCGGTGGTCCCTATCGGGATTATTTTCAGGTACTGCTTCCAGAAGGATCGATAATAAAATCAGTTACAAAAGATGATGTAGCCGTTGGGGAATACGATGAGAGCGAGATTGAATTTAAAAGCGTGGGATTATTTGTACAGCTTCAGCCGAGACAATCAACCGAGTTAAAAATATCATACGAACTACCAAGACAAATAAAAAGCGGAAGAAGCGTGTATCAACTAATTTTTCAAAAACAGATCGGTTCTAATAATTCTGATTTTATTCTGGAGATTACTCTTCCGAAAAACATTTCGCTTTCCAATCAAAATTTTTCTGCTCTTGTAAAAGACAACCGGATTTTCTATAATACTTCATTAACTGCTGACAAGATTTTTTTTCTTGAGCTTTTGAAATAA
PROTEIN sequence
Length: 758
MKLVVQESERKQEILLVDEKFTPLGKILKEELKKYDSTVYVSPHLPAKTDRFAYIFIVNKRREDLTLSIQKKQRVIFIFIQKKKWAEELTSFVRSRRLGNVKIVSVNSPYLDQSDLEKLFWFSFSKSREVFFKFDDRERHSKEPVVKKQLTPLRNFPFFTKKQLFLLFLLLFVLYHLLIFPPLFLSSFFIYRSAQTFKDGQLDKAKQTLKIAENLENTGKAFYSFSRPSYLLFSLALFSDTLVDVNDKAIETLDKTYISYENSRNIMSLVFEKGKTEEEKGLLEARLAKLKENISDIKNNLIFLDQKLADLPFGLANTYRKDLSKSVELIVKADNILPFTDKLLAKGKEMKYLLLFANNMELRPGGGFIGSFGVLTMKDLTLENIQVYDVYDADGQLLNHVTPPEPIRKYLNQPHWFLRDSAFSPDFYDNYNQAKFFLDQELKLGDFSGGILITTTAIQHLLDAYGQIHLPDFNEQINKDNFYLKAQYYAEKNFFPGSIQKKSFLGSVADQIILNVDDVSPAKLLQNVKKSFDEKQMTILVDDPEIQRVFDALYWSGKTIIPRCAIQTQNCVIDYVFPIDANLGVNKANFFVSRLLTQRVNIGEDGKIVSNLFVKLKNDSPNEAFPGGPYRDYFQVLLPEGSIIKSVTKDDVAVGEYDESEIEFKSVGLFVQLQPRQSTELKISYELPRQIKSGRSVYQLIFQKQIGSNNSDFILEITLPKNISLSNQNFSALVKDNRIFYNTSLTADKIFFLELLK*