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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_1
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(3..611)
-----------------
DNA (609bp)
protein (203aa)
Protein-export membrane protein SecF n=1 Tax=uncultured bacterium RepID=K2BGV8_9BACT
secF; protein-export membrane protein SecF
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(608..1957)
-----------------
DNA (1350bp)
protein (450aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=3563 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(1954..2529)
-----------------
DNA (576bp)
protein (192aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH id=3562 bin=ACD12 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Transcriptional regulator
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(2621..3778)
-----------------
DNA (1158bp)
protein (386aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F9L6_9BACT
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(3859..4305)
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein id=3378 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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4361..4654
-----------------
DNA (294bp)
protein (98aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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4732..4866
-----------------
DNA (135bp)
protein (45aa)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum RepID=A0RXN7_CENSY id=3560 bin=ACD12 species=Cenarchaeum symbiosum genus=Cenarchaeum taxon_order=Cenarchaeales taxon_class=unknown phylum=Thaumarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(4863..5405)
-----------------
DNA (543bp)
protein (181aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=3382 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
ligT; 2'-5' RNA ligase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(5383..5892)
-----------------
DNA (510bp)
protein (170aa)
Glycerol-3-phosphate cytidyltransferase TagD n=1 Tax=uncultured bacterium RepID=K2E7E3_9BACT
glycerol-3-phosphate cytidyltransferase TagD
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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5915..8188
-----------------
DNA (2274bp)
protein (758aa)
TPR repeat-containing protein id=3561 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
GDP-mannose 4,6 dehydratase ISS
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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8193..8975
-----------------
DNA (783bp)
protein (261aa)
50S ribosomal protein L25 n=1 Tax=uncultured bacterium RepID=K2F8S1_9BACT
50S ribosomal protein L25
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(8979..9515)
-----------------
DNA (537bp)
protein (179aa)
acetyltransferase (EC:2.3.1.-)
GCN5-related N-acetyltransferase (GNAT) domain id=5040534 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

9631..10908
-----------------
DNA (1278bp)
protein (426aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EVF5_9BACT
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

10956..12410
-----------------
DNA (1455bp)
protein (485aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXS3_9BACT
translation initiation factor IF-2
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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12417..13331
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EVX8_9BACT
DHH family/DHHA1 domain protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

13387..14412
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FQM3_9BACT
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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14449..15771
-----------------
DNA (1323bp)
protein (441aa)
BSCG--tRNA--synthetase--aspartyl
amt:Amet_3390 aspartyl-tRNA synthetase (EC:6.1.1.12); K09759 nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] id=35974 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
aspS1; aspartate--tRNA(Asp/Asn) ligase (EC:6.1.1.23)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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15777..16691
-----------------
DNA (915bp)
protein (305aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FBZ7_9BACT
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(16681..17730)
-----------------
DNA (1050bp)
protein (350aa)
transmembrane_regions 13..31 id=4273 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(17763..18068)
-----------------
DNA (306bp)
protein (102aa)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_trna_1
unknown

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18159..18241
-----------------
DNA (83bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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18343..19476
-----------------
DNA (1134bp)
protein (378aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248CB3E
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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19483..21189
-----------------
DNA (1707bp)
protein (569aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W8D0_MAGSA
ABC transporter ATPase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_trna_2
unknown

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21203..21273
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

21310..23136
-----------------
DNA (1827bp)
protein (609aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CA56_9BACT
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(23170..24231)
-----------------
DNA (1062bp)
protein (354aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Francisella sp. (strain TX077308) RepID=F8G912_FRAST
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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24316..24978
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00036EA42D
dipeptidase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_26
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(24982..25941)
-----------------
DNA (960bp)
protein (320aa)
2-hydroxyacid dehydrogenase n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002E857FD
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_27
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(26027..27109)
-----------------
DNA (1083bp)
protein (361aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L6L4_EXISA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_22_28
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(27351..27647)
-----------------
DNA (297bp)
protein (99aa)
Displaying items 1-30 of 48 in total

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