ggKbase home page

RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_26

Organism: Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_41_18

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 ASCG 9 / 38
Location: 20385..21017

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 421
  • Evalue 5.20e-115
transmembrane_regions 13..35 id=71973 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 217.0
  • Bit_score: 166
  • Evalue 2.20e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OP11_Roizmanbacteria_41_18 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 633
ATGACAAACAACCGTCTTTTTACAGTTTTCTGTATATTTCTTTTTCTTAATGTGTTTGCAATTGACGCTTGGATTTTAAATGTGGGAAATGTACAAGATCTAAAAAAACTTGAAGTAAATAAACAGCCCACTTCTACAAAACCTATAACTACATCTGTGCAGGCGTGTCCGCAGAGCTGTATTACCTACATTGAAGAGGCAACAGCAGCTTCACCTATCCCTGAAGTTGAAGCTCAGGCAGGAGGAACGCAGCAGGCGTCTTCACAGATAAGGGAATTTTTCGTACCGATCGGCTCTGGTACTAATTCTTCTGAAGATTGGGAAGATGTTCCCGGACTCCAGGTGATCGTAGACACGGCGCAATATGGAAAAATTAAAAATGCGTATTTTGAAGCAGCCGTCTATGTCCCCTCGGGAAATCAAATAGTGCATGTAAGACTGTATAATGCAACTGATAAACATCCTGTCTGGTATTCGGAACTTGCTTTTCCGAACGCAAATACTTCACAGCAATTAACTTCCGACAATATTACACTGGATCAAGGAAATAAAGCATATAAGGTGCAGATGAAGACGCAACTGAAGATTCCTGCGAGTCTCAACTCGTCAAGAATTAGAATTCTTACTCAGTGA
PROTEIN sequence
Length: 211
MTNNRLFTVFCIFLFLNVFAIDAWILNVGNVQDLKKLEVNKQPTSTKPITTSVQACPQSCITYIEEATAASPIPEVEAQAGGTQQASSQIREFFVPIGSGTNSSEDWEDVPGLQVIVDTAQYGKIKNAYFEAAVYVPSGNQIVHVRLYNATDKHPVWYSELAFPNANTSQQLTSDNITLDQGNKAYKVQMKTQLKIPASLNSSRIRILTQ*