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RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_1
R_OD1_41_19, Parcubacteria, Bacteria

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comp(697..1482)
-----------------
DNA (786bp)
protein (262aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Type IV pilus assembly protein PilM id=5227304 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
type IV pilus assembly protein PilM
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_2
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

1951..2808
-----------------
DNA (858bp)
protein (286aa)
GTPase Era n=1 Tax=uncultured bacterium RepID=K2F1N3_9BACT
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
GTP-binding protein Era
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_3
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(2805..3560)
-----------------
DNA (756bp)
protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZDK4_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(3577..4116)
-----------------
DNA (540bp)
protein (180aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_5
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(4124..5515)
-----------------
DNA (1392bp)
protein (464aa)
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2E6Z6_9BACT
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_6
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(5561..6169)
-----------------
DNA (609bp)
protein (203aa)
manganese/iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FB21_9BACT
Superoxide dismutase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_7
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(6186..6650)
-----------------
DNA (465bp)
protein (155aa)
Blue (Type 1) copper protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RSD3_9BACT
blue (type 1) copper domain-containing protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Blue (Type 1) copper protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_8
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(6675..7442)
-----------------
DNA (768bp)
protein (256aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=uncultured bacterium RepID=K2AJD5_9BACT
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_9
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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7491..7727
-----------------
DNA (237bp)
protein (79aa)
Putative membrane protein insertion efficiency factor n=1 Tax=uncultured bacterium RepID=K2FT87_9BACT
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_10
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(7768..8001)
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_11
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(8045..8437)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D175_9BACT
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
histidine triad (HIT) protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_12
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

8459..9460
-----------------
DNA (1002bp)
protein (334aa)
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EQ39_9GAMM
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_13
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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9467..10420
-----------------
DNA (954bp)
protein (318aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWI2_SULAA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_14
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

10446..11459
-----------------
DNA (1014bp)
protein (338aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12) Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
kol:Kole_2020 glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=3815 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
glyceraldehyde-3-phosphate dehydrogenase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_15
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

11456..12646
-----------------
DNA (1191bp)
protein (397aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
thx:Thet_1599 phosphoglycerate kinase (EC:2.7.2.3) id=3816 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Phosphoglycerate kinase (EC:2.7.2.3)
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_16
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(12635..13021)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EV62_9BACT
hypothetical protein; K09005 hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_trna_1
unknown

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13056..13130
-----------------
DNA (75bp)
transferRNA
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_17
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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13138..13692
-----------------
DNA (555bp)
protein (185aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_18
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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13685..14236
-----------------
DNA (552bp)
protein (184aa)
Prophage LambdaCh01 nuclease domain-containing protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQH4_CLOPA id=5088057 bin=OP11_3 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
prophage LambdaCh01 nuclease domain-containing protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
prophage LambdaCh01 nuclease domain-containing protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_19
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

14251..14565
-----------------
DNA (315bp)
protein (105aa)
periplasmic divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=5085138 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_20
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14554..15180)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein; K07130 arylformamidase [EC:3.5.1.9] Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PT92_METMA
hypothetical protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_21
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(15180..17528)
-----------------
DNA (2349bp)
protein (783aa)
G6PDH/6PGDH; G6PDH/6PGDH fusion protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
6-phosphogluconate dehydrogenase, decarboxylating id=3839745 bin=GWC2_OP3-like_45_7 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
glucose-6-phosphate dehydrogenase
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_22
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

17589..18098
-----------------
DNA (510bp)
protein (170aa)
flavodoxin Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
flavodoxin id=5084430 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_23
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(18070..18636)
-----------------
DNA (567bp)
protein (189aa)
seg 25..42 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
seg 25..42 id=71645 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_24
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(18707..19045)
-----------------
DNA (339bp)
protein (113aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=5084595 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Pterin 4 alpha carbinolamine dehydratase Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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19111..20382
-----------------
DNA (1272bp)
protein (424aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036D549D
natural resistance-associated macrophage protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
natural resistance-associated macrophage protein
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_26
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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20385..21017
-----------------
DNA (633bp)
protein (211aa)
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
transmembrane_regions 13..35 id=71973 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_27
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

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comp(21011..21274)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E157_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Putative zinc ribbon domain
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_28
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(21264..21701)
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036165FF
hypothetical protein Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
RIFCSPHIGHO2_12_OP11_41_18_rifcsphigho2_12_sub10_scaffold_59_29
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(21717..22844)
-----------------
DNA (1128bp)
protein (376aa)
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
Displaying items 1-30 of 43 in total

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