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rifcsphigho2_12_scaffold_5368

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_5368_1

Not on your lists

2..934
-----------------
DNA (933bp)
protein (311aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CF06F
Metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AJF62885.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_5368_2
unknown

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921..2969
-----------------
DNA (2049bp)
protein (683aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS Tax=AR20
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
rifcsphigho2_12_scaffold_5368_3
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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3017..4387
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein
id=5045312 Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
id=5045312 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_12_scaffold_5368_4
AR18, Woesearchaeaota, DPANN, Archaea

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5032..5283
-----------------
DNA (252bp)
protein (84aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=5044124 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase, subunit H
rifcsphigho2_12_scaffold_5368_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

5267..6757
-----------------
DNA (1491bp)
protein (497aa)
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5044123 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase
rifcsphigho2_12_scaffold_5368_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

6750..8552
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5044122 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase
rifcsphigho2_12_scaffold_5368_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8554..11145
-----------------
DNA (2592bp)
protein (864aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5044121 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase
rifcsphigho2_12_scaffold_5368_8

Not on your lists

11135..12244
-----------------
DNA (1110bp)
protein (370aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5044120 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO54682.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO54682.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-directed RNA polymerase subunit A''
rifcsphigho2_12_scaffold_5368_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12241..12483
-----------------
DNA (243bp)
protein (81aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tax=AR18
rifcsphigho2_12_scaffold_5368_10

Not on your lists

12480..12875
-----------------
DNA (396bp)
protein (132aa)
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5044118 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
N utilization substance protein A {ECO:0000313|EMBL:KHO54680.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_12_scaffold_5368_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


12875..13312
-----------------
DNA (438bp)
protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5044114 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR18
30S ribosomal protein S12
rifcsphigho2_12_scaffold_5368_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


13309..13911
-----------------
DNA (603bp)
protein (201aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=AR17
30S ribosomal protein S7
rifcsphigho2_12_scaffold_5368_13
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

13924..14142
-----------------
DNA (219bp)
protein (73aa)
cold-shock protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003672520
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KKQ84172.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
cspC; cold shock protein CspC
rifcsphigho2_12_scaffold_5368_14
unknown

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14197..15600
-----------------
DNA (1404bp)
protein (468aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5368_15
AR13, Pacearchaeaota, DPANN, Archaea

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15746..16234
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein Tax=AR13
rifcsphigho2_12_scaffold_5368_16
CG_Woesearch_02, Woesearchaeota, Archaea

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16404..18077
-----------------
DNA (1674bp)
protein (558aa)
Uncharacterized protein (Fragment) Tax=CG_Woesearch_02
Uncharacterized protein (Fragment) id=5048022 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
rifcsphigho2_12_scaffold_5368_17
unknown

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18074..18640
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5368_18
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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18730..19389
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU49099.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
rifcsphigho2_12_scaffold_5368_19

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19386..21371
-----------------
DNA (1986bp)
protein (662aa)
id=5048012 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45606.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_12_scaffold_5368_20
unknown

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comp(21374..22588)
-----------------
DNA (1215bp)
protein (405aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5368_21
unknown

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22667..24823
-----------------
DNA (2157bp)
protein (719aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA id=5103761 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA Tax=AR20
Elongation factor 2
rifcsphigho2_12_scaffold_5368_22
unknown

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24856..25161
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5368_23
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

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comp(25302..25634)
-----------------
DNA (333bp)
protein (111aa)
SET domain Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
SET domain id=11872 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
rifcsphigho2_12_scaffold_5368_24
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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25827..26126
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DL57_9BACT
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
Displaying 24 items

View Taxonomy