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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1852
DNA (1851bp) protein (617aa)
Leucine Rich Repeat family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
id=3443353 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
internalin A-like protein/S-layer protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1917..2852)
DNA (936bp) protein (312aa)
lpxC; CE11 : UDP-3-O-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=3994543 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_3

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comp(2956..4353)
DNA (1398bp) protein (466aa)
Cell division protein FtsZ id=3994549 bin=GWC2_Alphaproteobacteria_42_16 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ftsZ; cell division protein FtsZ
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5671)
DNA (1257bp) protein (419aa)
Cell division protein ftsA n=1 Tax=uncultured bacterium RepID=K2FEA2_9BACT
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
cell division protein FtsA
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5664..6503)
DNA (840bp) protein (280aa)
Cell division protein FtsQ id=3994553 bin=GWC2_Alphaproteobacteria_42_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
cell division protein ftsQ; K03589 cell division protein FtsQ Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6491..7411)
DNA (921bp) protein (307aa)
ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
D-alanine--D-alanine ligase n=1 Tax=uncultured bacterium RepID=K2EFW9_9BACT
D-alanine--D-alanine ligase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7408..8346)
DNA (939bp) protein (313aa)
UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
UDP-N-acetylenolpyruvoylglucosamine reductase id=3994558 bin=GWC2_Alphaproteobacteria_42_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
UDP-N-acetylenolpyruvoylglucosamine reductase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8353..9747)
DNA (1395bp) protein (465aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase id=3994560 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9765..10550)
DNA (786bp) protein (262aa)
hypothetical protein COdytL_07491 id=3994562 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10547..12550)
DNA (2004bp) protein (668aa)
id=3994564 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=3994564 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12565..13647)
DNA (1083bp) protein (361aa)
murG; GT28 : UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase id=3994565 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13634..14770)
DNA (1137bp) protein (379aa)
Cell division protein id=3994567 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ftsW; cell division protein FtsW; K03588 cell division protein FtsW Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
cell division protein FtsW
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14758..16167)
DNA (1410bp) protein (470aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=3994648 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16172..17263)
DNA (1092bp) protein (364aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
phospho-N-acetylmuramoyl-pentapeptide-transferase id=3994649 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17267..18658)
DNA (1392bp) protein (464aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_02_FULL_Alphaprote
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3994650 bin=GWC2_Alphaproteobacteria_42_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_16
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18643..20118)
DNA (1476bp) protein (492aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPHIGHO2_02_F
murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=uncultured bacterium RepID=K2EFV8_9BACT
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20119..21843)
DNA (1725bp) protein (575aa)
Division-specific transpeptidase id=3994652 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ftsI; division-specific transpeptidase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
ftsI; division-specific transpeptidase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21840..22169)
DNA (330bp) protein (110aa)
Periplasmic protein TonB n=1 Tax=uncultured bacterium RepID=K2DST9_9BACT
periplasmic protein TonB Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Periplasmic protein TonB (fragment)
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22170..23075)
DNA (906bp) protein (302aa)
Ribosomal RNA small subunit methyltransferase H id=3994654 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
mraW; S-adenosyl-dependent methyl transferase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
mraW; S-adenosyl-dependent methyl transferase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23068..23526)
DNA (459bp) protein (153aa)
COG2001: Uncharacterized protein conserved in bacteria id=3994655 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
mraZ family protein; K03925 MraZ protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
Displaying 20 items

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