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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1143)
DNA (1143bp) protein (381aa)
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1256..2068)
DNA (813bp) protein (271aa)
Uncharacterized 28.2 kDa protein in hemB 3'region n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK8_9BACT
Uncharacterized 28.2 kDa protein in hemB 3'region n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK8_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..2279)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AB109
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AB109
ChaB protein; K06197 cation transport regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ChaB protein; K06197 cation transport regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2413..3192)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4KR95_9GAMM
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4KR95_9GAMM
ABC transporter permease; K09694 lipooligosaccharide transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter permease; K09694 lipooligosaccharide transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3428..4339)
DNA (912bp) protein (304aa)
ABC transporter related protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPP8_SIDLE
ABC transporter related protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPP8_SIDLE
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..4895
DNA (234bp) protein (78aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..5336
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5353..6159
DNA (807bp) protein (269aa)
Putative transcriptional regulator n=1 Tax=Halomonas sp. A3H3 RepID=T2L3M7_9GAMM
Putative transcriptional regulator n=1 Tax=Halomonas sp. A3H3 RepID=T2L3M7_9GAMM
Putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6314..6880
DNA (567bp) protein (189aa)
hypothetical protein; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Peptide methionine sulfoxide reductase MsrB id=1894672 bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium NOR5-3 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Peptide methionine sulfoxide reductase MsrB id=1894672 bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium NOR5-3 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6951..7256)
DNA (306bp) protein (102aa)
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1A3F6_9ZZZZ
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1A3F6_9ZZZZ
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7265..7543)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer n=1 Tax=mine drainage metagenome RepID=T1D529_9ZZZZ
Plasmid maintenance system killer n=1 Tax=mine drainage metagenome RepID=T1D529_9ZZZZ
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..8360)
DNA (609bp) protein (203aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Glutathione S-transferase, C-terminal domain n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGD0_NITEC
Glutathione S-transferase, C-terminal domain n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGD0_NITEC
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8596..9369)
DNA (774bp) protein (258aa)
pirin n=1 Tax=Burkholderia kururiensis RepID=UPI0003467BEA
pirin n=1 Tax=Burkholderia kururiensis RepID=UPI0003467BEA
pirin domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pirin domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9474..9737)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9948..10685
DNA (738bp) protein (246aa)
DSBA oxidoreductase n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QDG3_SHELP
DSBA oxidoreductase n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QDG3_SHELP
DSBA oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DSBA oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10746..11147
DNA (402bp) protein (134aa)
HNH endonuclease domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0U0_9DELT
HNH endonuclease domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0U0_9DELT
HNH endonuclease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
HNH endonuclease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11363..11728
DNA (366bp) protein (122aa)
TusE/DsrC/DsvC family sulfur relay protein; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TusE/DsrC/DsvC family sulfur relay protein; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Sulfurtransferase id=1271015 bin=GWE1_Burkholderiales_65_30 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Sulfurtransferase id=1271015 bin=GWE1_Burkholderiales_65_30 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12240
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAQ8_9BRAD
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAQ8_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12380..13015
DNA (636bp) protein (212aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Radical SAM domain-containing protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4Z6_9GAMM
Radical SAM domain-containing protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4Z6_9GAMM
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13160..14155
DNA (996bp) protein (332aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
protease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D59CE
protease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D59CE
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14152..15045
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI00037B6F86
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI00037B6F86
collagenase-like protease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
collagenase-like protease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15072..15542)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3H1_9GAMM
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3H1_9GAMM
lipid carrier protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lipid carrier protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15650..17140
DNA (1491bp) protein (497aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WH03_9GAMM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WH03_9GAMM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17278..18666
DNA (1389bp) protein (463aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
coproporphyrinogen III oxidase (EC:1.3.99.22) rbh
coproporphyrinogen III oxidase (EC:1.3.99.22) rbh
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18858..19292
DNA (435bp) protein (145aa)
Large-conductance mechanosensitive channel n=2 Tax=Geobacter metallireducens RepID=MSCL_GEOMG
Large-conductance mechanosensitive channel n=2 Tax=Geobacter metallireducens RepID=MSCL_GEOMG
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19642..20403
DNA (762bp) protein (254aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Spiribacter salinus M19-40 RepID=R4VLT7_9GAMM
Crp/Fnr family transcriptional regulator n=1 Tax=Spiribacter salinus M19-40 RepID=R4VLT7_9GAMM
Crp/Fnr family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Crp/Fnr family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20493..21614
DNA (1122bp) protein (374aa)
bioB; biotin synthase (EC:2.8.1.6) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
bioB; biotin synthase (EC:2.8.1.6) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
bioB; biotin synthase (EC:2.8.1.6)
bioB; biotin synthase (EC:2.8.1.6)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21831..22220)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWM5_9GAMM
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWM5_9GAMM
hypothetical protein; K07095 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K07095 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22430..22849)
DNA (420bp) protein (140aa)
PIN domain protein n=3 Tax=Leptospira RepID=I0XQ56_9LEPT
PIN domain protein n=3 Tax=Leptospira RepID=I0XQ56_9LEPT
putative nucleic acid-binding protein, contains PIN domain Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative nucleic acid-binding protein, contains PIN domain Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_19766_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22797..23087)
DNA (291bp) protein (97aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying items 1-30 of 32 in total

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