| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2..1309
----------------- DNA (1308bp) protein (436aa) |
Sensor diguanylate cyclase/phosphodiesterase, PAS and PAS domain-containing n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF25_GEOSK
Sensor diguanylate cyclase/phosphodiesterase, PAS and PAS domain-containing n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF25_GEOSK
sensor diguanylate cyclase/phosphodiesterase, PAS, PAS and PAC domain-containing Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sensor diguanylate cyclase/phosphodiesterase, PAS, PAS and PAC domain-containing Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1385..3913
----------------- DNA (2529bp) protein (843aa) |
Signaling protein YkoW n=1 Tax=Paenibacillus sp. P22 RepID=T2LYC6_9BACL
Signaling protein YkoW n=1 Tax=Paenibacillus sp. P22 RepID=T2LYC6_9BACL
diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4218..7043
----------------- DNA (2826bp) protein (942aa) |
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B6F6_9PROT
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B6F6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7072..7407)
----------------- DNA (336bp) protein (112aa) |
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Uncharacterized protein id=4412601 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Uncharacterized protein id=4412601 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7404..8882)
----------------- DNA (1479bp) protein (493aa) |
lpdA2; dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lpdA2; dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lpdA2; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
lpdA2; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9088..10401)
----------------- DNA (1314bp) protein (438aa) |
Dihydrolipoamide acetyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3U9_9GAMM
Dihydrolipoamide acetyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3U9_9GAMM
2-oxoglutarate dehydrogenase E2 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
2-oxoglutarate dehydrogenase E2 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10420..13284)
----------------- DNA (2865bp) protein (955aa) |
alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
sucA; 2-oxoglutarate dehydrogenase (EC:1.2.4.2)
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13455..14072)
----------------- DNA (618bp) protein (206aa) |
dsba oxidoreductase; K03673 thiol:disulfide interchange protein DsbA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dsba oxidoreductase; K03673 thiol:disulfide interchange protein DsbA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Thiol:disulfide interchange protein DsbA id=1348379 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Thiol:disulfide interchange protein DsbA id=1348379 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14275..15684)
----------------- DNA (1410bp) protein (470aa) |
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=RIFCSPHIGHO2_12_FULL_Gam
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=RIFCSPHIGHO2_12_FULL_Gam
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLH0_THISH
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLH0_THISH
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15684..16181)
----------------- DNA (498bp) protein (166aa) |
Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3J8P0_NITOC
Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3J8P0_NITOC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16340..16795)
----------------- DNA (456bp) protein (152aa) |
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16875..18044
----------------- DNA (1170bp) protein (390aa) |
ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribonuclease D (EC:3.1.13.5)
ribonuclease D (EC:3.1.13.5)
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18095..18958
----------------- DNA (864bp) protein (288aa) |
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(19185..20405)
----------------- DNA (1221bp) protein (407aa) |
membrane-bound lytic murein transglycosylase A; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
membrane-bound lytic murein transglycosylase A; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
murein transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003614537
murein transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003614537
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20454..21200
----------------- DNA (747bp) protein (249aa) |
putative permease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative permease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative permease id=14632078 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
putative permease id=14632078 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(21299..23632)
----------------- DNA (2334bp) protein (778aa) |
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
topA; DNA topoisomerase I (EC:5.99.1.2)
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(23812..24294)
----------------- DNA (483bp) protein (161aa) |
Protein Smg homolog n=3 Tax=Nitrosococcus RepID=SMG_NITOC
Protein Smg homolog n=3 Tax=Nitrosococcus RepID=SMG_NITOC
hypothetical protein; K03747 Smg protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K03747 Smg protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24323..25483)
----------------- DNA (1161bp) protein (387aa) |
DNA protecting protein DprA n=2 Tax=Nitrosococcus oceani RepID=Q3J6U2_NITOC
DNA protecting protein DprA n=2 Tax=Nitrosococcus oceani RepID=Q3J6U2_NITOC
SMF protein; K04096 DNA processing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SMF protein; K04096 DNA processing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25518..26639)
----------------- DNA (1122bp) protein (374aa) |
LysM domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N5G3_9GAMM
LysM domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N5G3_9GAMM
peptidoglycan-binding LysM Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidoglycan-binding LysM Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26806..27309
----------------- DNA (504bp) protein (168aa) |
def_[H]; Peptide deformylase (EC:3.5.1.88) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
def_[H]; Peptide deformylase (EC:3.5.1.88) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
def_[H]; Peptide deformylase (EC:3.5.1.88)
def_[H]; Peptide deformylase (EC:3.5.1.88)
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
27427..28377
----------------- DNA (951bp) protein (317aa) |
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Methionyl-tRNA formyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YX82_9GAMM
Methionyl-tRNA formyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YX82_9GAMM
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28352..29695
----------------- DNA (1344bp) protein (448aa) |
16S rRNA methyltransferase B n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6D1K1_PSEST
16S rRNA methyltransferase B n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6D1K1_PSEST
16S rRNA methyltransferase B Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
16S rRNA methyltransferase B Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
29661..30245
----------------- DNA (585bp) protein (195aa) |
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JJJ4_9GAMM
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JJJ4_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
30218..32563
----------------- DNA (2346bp) protein (782aa) |
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003747B28
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003747B28
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
32560..33882
----------------- DNA (1323bp) protein (441aa) |
Ribosomal RNA small subunit methyltransferase B n=2 Tax=sulfur-oxidizing symbionts RepID=G2DF84_9GAMM
Ribosomal RNA small subunit methyltransferase B n=2 Tax=sulfur-oxidizing symbionts RepID=G2DF84_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
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