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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171..2063
DNA (1893bp) protein (631aa)
arginine decarboxylase; K01585 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
arginine decarboxylase; K01585 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Biosynthetic arginine decarboxylase n=1 Tax=uncultured bacterium RepID=K2C0T7_9BACT
Biosynthetic arginine decarboxylase n=1 Tax=uncultured bacterium RepID=K2C0T7_9BACT
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2238..2738)
DNA (501bp) protein (167aa)
Type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme [EC:3.1.21.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme [EC:3.1.21.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease (EC:3.1.21.4)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3740)
DNA (894bp) protein (298aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..4482)
DNA (573bp) protein (191aa)
Sporulation related protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXV0_METFK
Sporulation related protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXV0_METFK
sporulation related Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sporulation related Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4597..6447)
DNA (1851bp) protein (617aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6598..7254)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQU2_9GAMM
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQU2_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7254..9746)
DNA (2493bp) protein (831aa)
penicillin-binding protein, 1A family; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
penicillin-binding protein, 1A family; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Penicillin-binding protein, 1A family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3J7_NITHN
Penicillin-binding protein, 1A family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3J7_NITHN
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10007..11083
DNA (1077bp) protein (359aa)
Type IV pilus biogenesis protein PilM n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2D924_9GAMM
Type IV pilus biogenesis protein PilM n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2D924_9GAMM
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11080..11655
DNA (576bp) protein (192aa)
Fimbrial assembly family protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E3K9_9GAMM
Fimbrial assembly family protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E3K9_9GAMM
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11652..12278
DNA (627bp) protein (209aa)
Pilus assembly protein, PilO n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GYG3_METFK
Pilus assembly protein, PilO n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GYG3_METFK
pilus assembly protein, PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilus assembly protein, PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12281..12799
DNA (519bp) protein (173aa)
Pilus assembly protein PilP n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADV1_9PROT
Pilus assembly protein PilP n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADV1_9PROT
pilus assembly protein PilP Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilus assembly protein PilP Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12825..15497
DNA (2673bp) protein (891aa)
secretin n=1 Tax=Methylotenera RepID=UPI0003606FC1
secretin n=1 Tax=Methylotenera RepID=UPI0003606FC1
Type IV pilus biogenesis protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Type IV pilus biogenesis protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15578..16120
DNA (543bp) protein (181aa)
Shikimate kinase n=3 Tax=Acinetobacter RepID=N8TVR7_9GAMM
Shikimate kinase n=3 Tax=Acinetobacter RepID=N8TVR7_9GAMM
shikimate kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
shikimate kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16101..17186
DNA (1086bp) protein (362aa)
DHQS; 3-dehydroquinate synthase (EC:4.2.3.4 4.2.3.10); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DHQS; 3-dehydroquinate synthase (EC:4.2.3.4 4.2.3.10); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17483..18610
DNA (1128bp) protein (376aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1)
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18880..23430
DNA (4551bp) protein (1517aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23423..24868
DNA (1446bp) protein (482aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25040..26107
DNA (1068bp) protein (356aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
uroporphyrinogen decarboxylase (EC:4.1.1.37)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26113..26532
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J4A5_9GAMM
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J4A5_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26805..28142
DNA (1338bp) protein (446aa)
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28263..29603
DNA (1341bp) protein (447aa)
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29694..30245
DNA (552bp) protein (184aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30282..32255
DNA (1974bp) protein (658aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Cyanothece RepID=B7JVI6_CYAP8
Short-chain dehydrogenase/reductase SDR n=2 Tax=Cyanothece RepID=B7JVI6_CYAP8
short chain dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
short chain dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32357..32770)
DNA (414bp) protein (138aa)
NUDIX hydrolase (EC:3.6.1.17); K01518 bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
NUDIX hydrolase (EC:3.6.1.17); K01518 bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
NUDIX hydrolase (EC:3.6.1.17)
NUDIX hydrolase (EC:3.6.1.17)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33151..34443)
DNA (1293bp) protein (431aa)
Flavocytochrome c sulphide dehydrogenase flavin-binding n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDN9_CHLL2
Flavocytochrome c sulphide dehydrogenase flavin-binding n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDN9_CHLL2
Flavocytochrome c sulfide dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Flavocytochrome c sulfide dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34453..34842)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000370C38B
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000370C38B
cytochrome c class I Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytochrome c class I Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35334..35450)
DNA (117bp) protein (39aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35578..36144
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSJ7_9GAMM
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSJ7_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_4472_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36144..36764
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSJ8_9GAMM
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSJ8_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying items 1-30 of 46 in total

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