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RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_1
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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1..1314
DNA (1314bp) protein (438aa)
yapH; YapH protein
Uncharacterized protein {ECO:0000313|EMBL:KKR38256.1}; Flags: Fragment;; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38256.1}; Flags: Fragment;; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
prophage MuMc02, head decoration protein, putative id=6465 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_2

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1323..2051
DNA (729bp) protein (243aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E216_9ARCH
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E216_9ARCH
Sec-independent protein translocase protein TatC {ECO:0000313|EMBL:KKR39858.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Sec-independent protein translocase protein TatC {ECO:0000313|EMBL:KKR39858.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_3

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2091..2264
DNA (174bp) protein (58aa)
Sec-independent protein translocase protein TatA n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DZB9_9BACT
Sec-independent protein translocase protein TatA n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DZB9_9BACT
Sec-independent protein translocase protein TatA {ECO:0000313|EMBL:KKR39857.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Sec-independent protein translocase protein TatA {ECO:0000313|EMBL:KKR39857.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_4

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2277..2507
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39856.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_5
GWC2_OD1_39_41, Nomurabacteria, Parcubacteria, Bacteria

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2514..3029
DNA (516bp) protein (172aa)
Tax=GWC2_OD1_39_41
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_6

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3036..4163
DNA (1128bp) protein (376aa)
Putative uncharacterized protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PHU3_9ZZZZ
Putative uncharacterized protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PHU3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKR39854.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39854.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_7

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4181..5215
DNA (1035bp) protein (345aa)
WGS project CAID00000000 data, contig chromosome 01 (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01FQ9_OSTTA
WGS project CAID00000000 data, contig chromosome 01 (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01FQ9_OSTTA
Uncharacterized protein {ECO:0000313|EMBL:KKR39853.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39853.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_8
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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5227..5736
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVF9_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVF9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR38263.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38263.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_9
GWA1_OD1_40_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(5783..9271)
DNA (3489bp) protein (1163aa)
Alpha amylase catalytic region {ECO:0000313|EMBL:KKR73754.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
Alpha amylase catalytic region {ECO:0000313|EMBL:KKR73754.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
Glycoside hydrolase family 10 id=2302445 bin=GWB2_Desulfobacterales_56_26 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Glycoside hydrolase family 10 id=2302445 bin=GWB2_Desulfobacterales_56_26 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_10

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9493..10275
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39848.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39848.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
transmembrane_regions id=5226898 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transmembrane_regions id=5226898 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_11

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10285..11169
DNA (885bp) protein (295aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39847.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_12
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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11175..13208
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWT5_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWT5_9BACT
fibronectin type III protein
Uncharacterized protein {ECO:0000313|EMBL:KKR38268.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_13
GWC2_OD1_39_41, Nomurabacteria, Parcubacteria, Bacteria

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13293..13556
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0J5_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0J5_9BACT
Copper-sensing transcriptional repressor csoR {ECO:0000313|EMBL:KKR20403.1}; TaxID=1618754 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_39_41.;"
Copper-sensing transcriptional repressor csoR {ECO:0000313|EMBL:KKR20403.1}; TaxID=1618754 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_39_41.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_14

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13570..15891
DNA (2322bp) protein (774aa)
copper-transporting ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5091114 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
copper-transporting ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5091114 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KKR39844.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bac
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KKR39844.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bac
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7231_15

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15888..16340
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037064D4
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037064D4
Uncharacterized protein {ECO:0000313|EMBL:KKR39843.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39843.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Displaying 15 items

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