ggKbase home page

rifcsphigho2_12_scaffold_853_curated

Search features with annotation key words

Displaying items 1-30 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_853_curated_1
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

231..989
DNA (759bp) protein (253aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=15191445 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_2
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

986..2008
DNA (1023bp) protein (341aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=15191444 bin=GWC1_OP11_49_16_COMPLETE species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_3
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

2028..2495
DNA (468bp) protein (156aa)
id=15191443 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_4
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


2522..2833
DNA (312bp) protein (104aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 id=15191442 bin=GWC1_OP11_49_16_COMPLETE species=Selenomonas infelix genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
50S ribosomal protein L21 {ECO:0000313|EMBL:KKU61631.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
rifcsphigho2_12_scaffold_853_curated_5
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


2908..3153
DNA (246bp) protein (82aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=15191441 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_6
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

3156..3989
DNA (834bp) protein (278aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family id=15191440 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_7
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(3979..4551)
DNA (573bp) protein (191aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=15191439 bin=GWC1_OP11_49_16_COMPLETE species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000313|EMBL:KKU61628.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
rifcsphigho2_12_scaffold_853_curated_8
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(4676..5470)
DNA (795bp) protein (265aa)
id=15191438 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_9
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

5529..6380
DNA (852bp) protein (284aa)
uridine kinase; K00876 uridine kinase [EC:2.7.1.48] id=15191437 bin=GWC1_OP11_49_16_COMPLETE species=Halogranum salarium genus=Halogranum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
uridine kinase; K00876 uridine kinase [EC:2.7.1.48]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_10
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

6471..8294
DNA (1824bp) protein (608aa)
id=15191436 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_11
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

8411..8983
DNA (573bp) protein (191aa)
id=15191435 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_12
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(8959..11280)
DNA (2322bp) protein (774aa)
PGAP1 family protein id=15191434 bin=GWC1_OP11_49_16_COMPLETE species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_13
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

11613..12383
DNA (771bp) protein (257aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=15191433 bin=GWC1_OP11_49_16_COMPLETE species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_14
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

12380..13387
DNA (1008bp) protein (336aa)
glycosyltransferase, group 1 family protein id=15191432 bin=GWC1_OP11_49_16_COMPLETE species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
glycosyltransferase, group 1 family protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_15
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

13434..14306
DNA (873bp) protein (291aa)
hypothetical protein id=15191431 bin=GWC1_OP11_49_16_COMPLETE species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_16
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

14313..14975
DNA (663bp) protein (221aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] id=15191430 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_17
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

14976..15863
DNA (888bp) protein (296aa)
putative glycosyltransferase id=15191429 bin=GWC1_OP11_49_16_COMPLETE species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
putative glycosyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_18
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

15867..17096
DNA (1230bp) protein (410aa)
membrane protein id=15191428 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
membrane protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_19
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

17093..18085
DNA (993bp) protein (331aa)
id=15191427 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_20
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

18063..19085
DNA (1023bp) protein (341aa)
group 1 glycosyl transferase id=15191426 bin=GWC1_OP11_49_16_COMPLETE species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_21
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

19278..21257
DNA (1980bp) protein (660aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKU60716.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
family 2 glycosyl transferase id=15191425 bin=GWC1_OP11_49_16_COMPLETE species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
family 2 glycosyl transferase
rifcsphigho2_12_scaffold_853_curated_22
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

21250..21867
DNA (618bp) protein (206aa)
glycosyl transferase id=15191424 bin=GWC1_OP11_49_16_COMPLETE species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_23
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

21842..22231
DNA (390bp) protein (130aa)
dolichyl-phosphate-mannose-protein mannosyltransferase proteins (EC:2.4.1.109) id=15191423 bin=GWC1_OP11_49_16_COMPLETE species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_24
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

22261..23061
DNA (801bp) protein (267aa)
dolichyl-phosphate-mannose-protein mannosyltransferase proteins (EC:2.4.1.109) id=15191423 bin=GWC1_OP11_49_16_COMPLETE species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_25
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

23058..24209
DNA (1152bp) protein (384aa)
Uncharacterized protein id=15191422 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_26
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

24216..25040
DNA (825bp) protein (275aa)
id=15191421 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_27
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(25026..25757)
DNA (732bp) protein (244aa)
hypothetical protein id=15191420 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_28
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

25867..27099
DNA (1233bp) protein (411aa)
hypothetical protein id=15191419 bin=GWC1_OP11_49_16_COMPLETE species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_29
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(27250..29061)
DNA (1812bp) protein (604aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=15191418 bin=GWC1_OP11_49_16_COMPLETE species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_853_curated_30
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(29162..29365)
DNA (204bp) protein (68aa)
id=15191417 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
Displaying items 1-30 of 298 in total

View Taxonomy