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rifcsplowo2_01_scaffold_7693

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7693_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3..2015)
DNA (2013bp) protein (671aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR17
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=3672913 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_7693_2
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2052..2456)
DNA (405bp) protein (135aa)
Tax=AR17
rifcsplowo2_01_scaffold_7693_3
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

2512..3333
DNA (822bp) protein (274aa)
hypothetical protein Tax=AR17
Pyridoxal phosphate-dependent transferase, major domain id=5799544 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_7693_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3378..3848
DNA (471bp) protein (157aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR17
rifcsplowo2_01_scaffold_7693_5
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3791..3970
DNA (180bp) protein (60aa)
Tax=AR17
rifcsplowo2_01_scaffold_7693_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3980..4192
DNA (213bp) protein (71aa)
Tax=AR17
rifcsplowo2_01_scaffold_7693_7
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

4253..4441
DNA (189bp) protein (63aa)
Tax=AR17
rifcsplowo2_01_scaffold_7693_8

Not on your lists

comp(4553..5344)
DNA (792bp) protein (264aa)
Transposase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TD3_METBU
Transposase, IS4 {ECO:0000313|EMBL:KHO52373.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
transposase, IS4
rifcsplowo2_01_scaffold_7693_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5493..5654)
DNA (162bp) protein (54aa)
histone HMtB Tax=AR17
hpyA1-1; histone A1 id=5049703 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_7693_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


5948..6916
DNA (969bp) protein (323aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=AR17
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5046839 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L3
rifcsplowo2_01_scaffold_7693_11

Not on your lists


6913..7737
DNA (825bp) protein (275aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P, large subunit ribosomal protein L4e {ECO:0000313|EMBL:AJS12139.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifcsplowo2_01_scaffold_7693_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


7734..8000
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=AR17
50S ribosomal protein L23P
rifcsplowo2_01_scaffold_7693_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


8002..8727
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003710343
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 Tax=AR17
50S ribosomal protein L2
rifcsplowo2_01_scaffold_7693_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


8728..9126
DNA (399bp) protein (133aa)
30S ribosomal protein S19P n=1 Tax=Pyrococcus sp. ST04 RepID=I3RGB2_9EURY
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=AR17
30S ribosomal protein S19
rifcsplowo2_01_scaffold_7693_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


9129..9596
DNA (468bp) protein (156aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=AR17
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L22P
rifcsplowo2_01_scaffold_7693_16

Not on your lists


9593..10354
DNA (762bp) protein (254aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQL3_9ZZZZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
30S ribosomal protein S3
rifcsplowo2_01_scaffold_7693_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


10338..10559
DNA (222bp) protein (74aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=AR17
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5042307 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L29
rifcsplowo2_01_scaffold_7693_18
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10552..10884
DNA (333bp) protein (111aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC6_METFV
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=AR17
translation initiation factor 1 (eif-1/sui1)
rifcsplowo2_01_scaffold_7693_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10881..11141
DNA (261bp) protein (87aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=AR17
Ribonuclease P protein component 1 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RET8_METVM
ribonuclease P protein component 1
rifcsplowo2_01_scaffold_7693_20

Not on your lists


11138..11473
DNA (336bp) protein (112aa)
30S ribosomal protein S17P n=2 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS17_PYRHO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
rifcsplowo2_01_scaffold_7693_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


11470..11871
DNA (402bp) protein (134aa)
50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 Tax=AR17
50S ribosomal protein L14P id=5800053 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_7693_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


11875..12273
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L26e (L24p); K02895 large subunit ribosomal protein L24 Tax=AR17
50S ribosomal protein L24P
rifcsplowo2_01_scaffold_7693_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12273..12959
DNA (687bp) protein (229aa)
30S ribosomal protein S4e n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRU0_METIM
ribosomal protein S4E, central domain protein; K02987 small subunit ribosomal protein S4e Tax=AR17
ribosomal protein S4E, central domain protein
rifcsplowo2_01_scaffold_7693_24
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


12962..13489
DNA (528bp) protein (176aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=AR17
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5046852 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L5
rifcsplowo2_01_scaffold_7693_25
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

13486..13716
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=AR17
SSU ribosomal protein S14P
rifcsplowo2_01_scaffold_7693_26

Not on your lists


13718..14110
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=3 Tax=Methanotorris RepID=RS8_METIG id=5103267 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
30S ribosomal protein S8
rifcsplowo2_01_scaffold_7693_27
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


14112..14651
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=5 Tax=Thermococcus RepID=RL6_PYRKO id=5103268 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 Tax=AR17
50S ribosomal protein L6
rifcsplowo2_01_scaffold_7693_28
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

14654..15241
DNA (588bp) protein (196aa)
rpl32e; 50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e Tax=AR17
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5041776 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl32e; 50S ribosomal protein L32
rifcsplowo2_01_scaffold_7693_29
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15238..15702
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381F97D
ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=AR17
50S ribosomal protein L19e
rifcsplowo2_01_scaffold_7693_30
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


15699..16196
DNA (498bp) protein (166aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=AR17
50S ribosomal protein L18
Displaying items 1-30 of 46 in total

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